DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and Syt13

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_110466.2 Gene:Syt13 / 80977 RGDID:621877 Length:426 Species:Rattus norvegicus


Alignment Length:430 Identity:113/430 - (26%)
Similarity:192/430 - (44%) Gaps:104/430 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 SLASLAGGSGMGGSSAGKGVAGGRCLSPLLIP-----PR--------SQPG---------VDPAM 309
            |:..:|.|:.:|.:::...:.|..||...:.|     ||        ::||         |..:.
  Rat     4 SVPVIALGATLGTATSILALCGVTCLCRHMHPKKGLLPRDREPDPEKARPGVLQAAQQFNVKKST 68

  Fly   310 GPASPLGALQ-PDLYRMPDGP-VYLTAPE----SSHAVG-------------------------- 342
            .|..|...|: ||:|    || ..:||||    :.:.:|                          
  Rat    69 EPVQPRPLLKFPDIY----GPRPAVTAPEVINYADYTLGTTEESAAPASPQAQSDSRLKRQVTEE 129

  Fly   343 -------------------------------RLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGGFR 376
                                           :||.|:.||....:|.|..:||  ::...|||. 
  Rat   130 LFILPQNGVVEDVCVMETWNPEKAASWNQAPKLHFRLDYDQKKAELFVTSLEA--VTSDHEGGC- 191

  Fly   377 DPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIG 441
            |.|::..:..:..|.:.||.:.:.:.:..:::....|:..::|....|.|.:...||:|.:.:||
  Rat   192 DCYIQGSVAVKTGSVEAQTALKKRQLHTTWEEGLTLPLGEEELPTATLTLTLRTCDRFSRHSVIG 256

  Fly   442 EVRISVDGLDLSKSVEIWGDLLRT-KKPKEDRPELLCSLNYLPQAERLTVVIMKARNLDTLQ--- 502
            |:|:.::|..:......||:|..| |:|.....|:|.|::|||.|.||.||::||:||.:.|   
  Rat   257 ELRLGLNGASVPLGTAQWGELKTTAKEPSAGTGEVLLSISYLPAANRLLVVLIKAKNLHSNQSKE 321

  Fly   503 ----EPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSNYLHNAAIEIYVVGAGSE 563
                :..||:.|....:::|||:|.  ::....||:|||...|.|..:.|..:::|:.|:|.|.|
  Rat   322 LLGKDVSVKVTLKHQAQKLKKKQTK--RAKHKINPVWNEMIMFELPDDLLQASSVELEVLGQGEE 384

  Fly   564 --ATEIGCCGLGPQESGTGCQHWHDMINNARKPTAMWHYI 601
              :.|:|.|.||...||:...||.:|:.|.|:..||||.:
  Rat   385 GPSCELGRCSLGLHASGSERSHWEEMLKNPRRQIAMWHQL 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 32/178 (18%)
C2B_Synaptotagmin 473..601 CDD:175975 52/136 (38%)
Syt13NP_110466.2 C2 160..277 CDD:301316 31/119 (26%)
C2B_Synaptotagmin-13 288..425 CDD:176052 52/139 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352760
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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