DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and syt3

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001186849.1 Gene:syt3 / 779540 XenbaseID:XB-GENE-956378 Length:544 Species:Xenopus tropicalis


Alignment Length:486 Identity:141/486 - (29%)
Similarity:220/486 - (45%) Gaps:85/486 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 HGMHGGMGLNHHHMGTVSATGTDILRGPAEVFHSPLHLHHQSRSFPPRLQRTPSISSQSSVDSAP 196
            ||.||  .|:|.|.|.:.|...::  ||    ..|...:....|:|....:....|....|||.|
 Frog    98 HGHHG--HLHHSHYGDLLADRVEL--GP----EMPERSYLDMDSYPETNIKISQTSPDIPVDSQP 154

  Fly   197 SRHS--GHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPSPMRTISLDARCGSPAHSADPGDLR 259
            .:.|  .:..|..|:....|...:        |.::|                 ||:.|......
 Frog   155 PKESQIPYAQSHQQVANIAPANVA--------PANVA-----------------PANVAPANRYS 194

  Fly   260 T-PSPSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRSQPGVDPAMGPASPLGALQPDLY 323
            | |.|....|:|                            |.....||.....|:.:|.::|:||
 Frog   195 TLPRPMTQQLSS----------------------------PDFSGHVDEKPEQATSIGQIKPELY 231

  Fly   324 RMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEV 388
            :.......:...|:: :.||:...::|.|:...|.|.:::|..|...:..||.||||::.|.|: 
 Frog   232 KQRSADAEMKKQEAT-SCGRISFILRYAYNSEQLVVKILKALELPAKDANGFSDPYVKMYLLPD- 294

  Fly   389 DSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLS 453
            ..:|.||.:||...||.|::.|.|.|..::||.::|...:.|:||:|.:|:||:|.:. :.|:.|
 Frog   295 RKKKFQTKVHRKTLNPIFNETFHFNVPFNELQNRKLHFSIYDFDRFSRHDLIGQVVLD-NLLEFS 358

  Fly   454 KSVE---IWGDLLRTKKPKEDRPELLCSLNYLPQAERLTVVIMKARNLDTL-----QEPYVKIYL 510
            .:.:   ||.|:|.....|.|..|:..||.|||.|.|||..|:||.||..:     .:||||..|
 Frog   359 NATDETPIWRDILEASSEKADLGEINFSLCYLPTAGRLTATIIKATNLKAMDLTGFSDPYVKASL 423

  Fly   511 IQNGKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSNYLHNAAIEIYV-----VGAGSEATEIGCC 570
            |..|:|:||:||||.|  :..||.:|||..|::.:..:.:.::.|.|     :|...   .||.|
 Frog   424 ICEGRRLKKRKTSIKK--NTLNPTYNEALVFDIPNENMDHVSLTIAVMDYDCIGHNE---VIGMC 483

  Fly   571 GLGPQESGTGCQHWHDMINNARKPTAMWHYI 601
            .:|......|.:||::|:.|.|||...||.:
 Frog   484 RVGSDADMQGREHWNEMLANPRKPIEHWHQL 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 43/124 (35%)
C2B_Synaptotagmin 473..601 CDD:175975 53/137 (39%)
syt3NP_001186849.1 C2A_Synaptotagmin-1-5-6-9-10 248..372 CDD:176031 43/125 (34%)
C2B_Synaptotagmin-3-5-6-9-10 381..514 CDD:176048 53/137 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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