DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and sytl1

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001122005.1 Gene:sytl1 / 777759 ZFINID:ZDB-GENE-060503-439 Length:539 Species:Danio rerio


Alignment Length:504 Identity:105/504 - (20%)
Similarity:180/504 - (35%) Gaps:142/504 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 RGPAEVFHSPL----------------------HLHHQ---SRSFPPRLQRTPSISSQSSVDSAP 196
            :|.|:|.|:.|                      |:|.|   .|:....||  .:::.:.......
Zfish    69 KGGADVVHASLRRKRRGKDLPLTAIFDKGNNSSHVHEQQEEDRNAERDLQ--GNMNEREDDKHQE 131

  Fly   197 SRHSGHR-GSS--------PQIRTFGPDGRSSLPSEPGFPHHLARS--------PSPMRTISLDA 244
            .:.||.. |.|        ||.||.....|:.:... ||...:..|        ||...|:.:|:
Zfish   132 QKESGQEDGESLISNAITIPQSRTRNVTKRNEILGS-GFEDSVEESENKERRILPSTSPTLQIDS 195

  Fly   245 RCGSPAHSADPGDLRTPSPSQS-----SLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRSQPG 304
            .          ||:.:.|...:     |:.||.....|.||..                      
Zfish   196 E----------GDIDSGSTEINYTRFGSVTSLTSHHMMNGSLM---------------------- 228

  Fly   305 VDPAMGPASPLGALQPDLYRMPD-GPVYLTAPESSHAVGRLHLRVKYDYHLFDLTVHLIEAHNLS 368
                            .||.:.| |.|.::        ||:...::||....:|.||:|...:|:
Zfish   229 ----------------SLYSVGDFGDVVVS--------GRIQFSLQYDVRTEELYVHIIRCQDLA 269

  Fly   369 PIEEGGFRDPYVRLMLQPEVDSR-KRQTHIHRGESNPYFDQHFKFPVSRDQLQGKELILQVLDYD 432
            ...:.. .||||::.|.|:..|| |::|.:.|...||.:|:...:.|.|..|..:.|.:.|...:
Zfish   270 SARKNR-SDPYVKVYLLPDNTSRSKKKTAVRRKTLNPVYDETMTYKVRRLDLPARVLSMSVWHME 333

  Fly   433 RYSHNDIIGEVRISVDGLDLSKSVEIWGDLL-RTKKPKE---DRPELLCSLNYLPQAE------- 486
            |...|..:||:.:.:...|.|::...|.:|. |.:...|   .|..:|.|:.::|...       
Zfish   334 RMRRNLFLGELEVRLGQWDWSQNQPTWQNLQPRVQLSPEAIISRGTILFSIKFVPPGSEGRGNPA 398

  Fly   487 --------RLTVVIMKARNLDTLQEPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFN- 542
                    |..|.::..:.  .....|||..::.:...:..::|.:.:..  .:|::|....:: 
Zfish   399 TGELHIWLREIVGLLPTKR--GAPNTYVKSVVLPDESGVSGQQTRVVRGS--VSPVFNHTMVYDG 459

  Fly   543 LQSNYLHNAAIEIYVVGAGSEATEIGCCGLGPQESGTGCQH-----WHD 586
            .||:.|..|..||.|......    ||.|.....:|:|..:     |.|
Zfish   460 FQSSDLIQACAEITVWNPHPS----GCLGGVRLSTGSGLSYGQSVCWMD 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 35/122 (29%)
C2B_Synaptotagmin 473..601 CDD:175975 25/135 (19%)
sytl1NP_001122005.1 PHD_SF 12..>43 CDD:304600
C2A_SLP-1_2 242..364 CDD:176039 35/130 (27%)
C2B_SLP_1-2-3-4 377..531 CDD:175987 26/136 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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