DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and Tc2n

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001076445.1 Gene:Tc2n / 74413 MGIID:1921663 Length:489 Species:Mus musculus


Alignment Length:555 Identity:107/555 - (19%)
Similarity:187/555 - (33%) Gaps:141/555 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 SASSVTSTTSGIGSVSAGSVSD--SCD-------LPTDSEEVAIAK---ECQPIQPASQLHGMHG 136
            |||| :..|.||..:::..|..  .|:       ||.|.:||....   :...|||.:|      
Mouse    32 SASS-SQNTIGIPPLTSVLVKPQVGCNEDYLLSKLPCDGKEVQFVVPRFKLSYIQPRTQ------ 89

  Fly   137 GMGLNHH---HMGTVSATGTD--------ILRGPAEVFHSPLHLHHQSRSFPPRLQR--TPSISS 188
              |:..|   ..|:..|:..|        ...||:...::|.:::   :.|.|.|.|  .|...:
Mouse    90 --GIPSHLDELEGSARASFGDQKTELCSSFYHGPSYDVYNPCYMY---QHFSPDLSRRFLPHCET 149

  Fly   189 QSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPSPMRTISLDARCGSPAHSA 253
            :...           ||...:||      |.||                         ||...|.
Mouse   150 KQLY-----------GSVCDLRT------SKLP-------------------------GSSGLSK 172

  Fly   254 DPGDLRTPS----PSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRSQPGVDPAMGPASP 314
            ...||.|.|    ....|.:|:...|....:|.|                 |...:|.       
Mouse   173 SMLDLTTSSQRFIQRHDSFSSVPSSSSSRKNSQG-----------------SNRSLDT------- 213

  Fly   315 LGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFDLTVHLIEAHNLS-PIEEGGFRDP 378
                             :|.......:|||::::.|:.....:.:.:::..::| |...|.....
Mouse   214 -----------------ITLSGDERDLGRLNVKLFYNSSAEQIWITVLQCRDISWPSSYGDTPTI 261

  Fly   379 YVR--LMLQPEVDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIG 441
            .::  |.|...|..:   :....|.:...|.:.|.|.:....||...|..::  ..:......||
Mouse   262 SIKGILTLSKPVHFK---SSAKEGSNAIEFMETFVFAIKLQNLQAVRLAFKI--QTQTPKKKTIG 321

  Fly   442 EVRISVDGLDLSKSVEIWGDLLRTKKPKEDRPELLCSLNYLPQAERLTVVIMKARNLDTLQEP-- 504
            |..:|:..|. ::.:|...:::...|....:.||.....:.....|:.:.|::|:.|.:...|  
Mouse   322 ECSLSLRTLS-TQEMEYSLEIIAPSKISVCQAELELGTCFQAVNSRIQLQILEAQYLPSSSTPLT 385

  Fly   505 ---YVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFNL-QSNYLHNAAIEIYVVGAGSEAT 565
               :||:.:..:|:.|.||||.:.|:.. ....|.|...|.| |:.......|::|...:.....
Mouse   386 LSFFVKVGMFSSGELIYKKKTRLLKASS-GRVKWGETMIFPLIQTEKEIVFLIKLYSRSSVRRKH 449

  Fly   566 EIGCCGLGPQESG-TGCQHWHDMINNARKPTAMWH 599
            .:|...:....:. .....|.:.|.|..|....||
Mouse   450 FVGQLWISEDSNNIEAVNQWKETITNPEKVVIKWH 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 23/124 (19%)
C2B_Synaptotagmin 473..601 CDD:175975 30/134 (22%)
Tc2nNP_001076445.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..214 7/65 (11%)
C2A_Tac2-N 239..341 CDD:176066 19/107 (18%)
C2B_Tac2-N 352..486 CDD:176074 30/134 (22%)
Nuclear localization signal 446..448 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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