DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and Syt9

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_038944965.1 Gene:Syt9 / 60564 RGDID:621169 Length:566 Species:Rattus norvegicus


Alignment Length:302 Identity:108/302 - (35%)
Similarity:162/302 - (53%) Gaps:28/302 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 LGALQPDLYRM-----PDGPVYLTAPESSHAVGRLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGG 374
            :|.::|:||:.     .||     ...:|.|.|:|:..:|||..|..|.|.:.:|.||...:..|
  Rat   195 IGRIKPELYKQRSLDNDDG-----RRSNSKACGKLNFILKYDCDLEQLIVKIHKAVNLPAKDFSG 254

  Fly   375 FRDPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDI 439
            ..||||::.|.|: ...|.||.:||...||.||:.|.|||..:.|:.::|...|.|:||:|.:|:
  Rat   255 TSDPYVKIYLLPD-RKTKHQTKVHRKTLNPVFDEVFLFPVHYNDLEARKLHFSVYDFDRFSRHDL 318

  Fly   440 IGEVRIS--VDGLDLSKSVEIWGDLLRTKKPKEDRPELLCSLNYLPQAERLTVVIMKARNLDTL- 501
            ||:|.:.  .|..|..:...:|.|:........|..||:.||.|||.|.|||:.|:|||||..: 
  Rat   319 IGQVVVDHFFDLADFPRECILWKDIEYVTNDNVDLGELMFSLCYLPTAGRLTITIIKARNLKAMD 383

  Fly   502 ----QEPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSNYLHNAAIEIYV----- 557
                .:||||:.|:.:|:|:||:|||..:  :..||::|||..|::....:....:.|.|     
  Rat   384 ITGASDPYVKVSLMCDGRRLKKRKTSTKR--NTLNPVYNEAIVFDVPPESIDQIHLSIAVMDYDR 446

  Fly   558 VGAGSEATEIGCCGLGPQESGTGCQHWHDMINNARKPTAMWH 599
            ||...   .||.|.:|.:....|..||.:|::..|||.|.||
  Rat   447 VGHNE---VIGVCQVGNEAERLGRDHWSEMLSYPRKPIAHWH 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 46/123 (37%)
C2B_Synaptotagmin 473..601 CDD:175975 53/137 (39%)
Syt9XP_038944965.1 C2 221..345 CDD:417471 46/124 (37%)
C2B_Synaptotagmin-3-5-6-9-10 354..487 CDD:176048 53/137 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.780

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