DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and sytl2b

DIOPT Version :10

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_701277.6 Gene:sytl2b / 572466 ZFINID:ZDB-GENE-121214-363 Length:1737 Species:Danio rerio


Alignment Length:592 Identity:118/592 - (19%)
Similarity:225/592 - (38%) Gaps:149/592 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 HILPIGEGSTTPPPQPMTPPPSASSVTSTTSGIGSVSAGSVSDSCDLPTDSEEVAIAKECQPIQP 127
            |.|.|.|..:.     .||||.|..|....              |...|.|.|...:.:|.|::.
Zfish  1211 HYLGISEDKSM-----YTPPPVAEQVDDFI--------------CTSFTSSPETNHSCKCPPVKT 1256

  Fly   128 ASQLHG------MHGGMGLNHHHMGTVSATGTDILRG-----------PAEVFHSPLHLHHQSRS 175
            ::.:||      ..|.:|   ||:.|  .|..:|::|           .|....|...::|:|  
Zfish  1257 STPVHGSPDLQTRSGSLG---HHLTT--QTDGNIIKGIQNRENESLIQKALKRASSRPVYHKS-- 1314

  Fly   176 FPPRLQRTPSISSQSS--VDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARS-PSPM 237
                ::...||:.|..  ..:....|..:..||..::|      |...::|.....|::| ||.:
Zfish  1315 ----MEDISSIARQDQKLKQTDDYMHDNYDASSTHLQT------SFSTADPEHMKKLSKSVPSFL 1369

  Fly   238 RTISLDARCGSPAHSADPGDLRTPSPSQSSL-----ASLAGGSGMGGSSAGKGVAGGRCLSPLLI 297
            .            ..:|.|:..:.|.|:.|:     ......|...||::...|:|         
Zfish  1370 E------------KESDGGESDSESSSRGSVPKWNNRQFTNLSNYSGSTSLSSVSG--------- 1413

  Fly   298 PPRSQPGVDPAMGPASPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFDLTVHLI 362
                        ..||                ||.:...|....|.:...:.|.:.|.:..:.::
Zfish  1414 ------------SVAS----------------VYTSDYNSVDVQGSIQFSLNYVHKLREFHIFVV 1450

  Fly   363 EAHNLSPIEEGGFR-DPYVRLMLQPE-VDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQGKELI 425
            :..||:.::....| ||||:..|.|: .:..||:|.:.:...||.:::..::.|..:.|..:.|.
Zfish  1451 QCQNLAAVDAKRNRSDPYVKSYLIPDPANLGKRKTAVKKKTLNPTYNEILRYRVRMEYLTSQVLN 1515

  Fly   426 LQVLDYDRYSHNDIIGEVRISVDGLDLS---------KSVEIWGDLLRTKKPKEDRPELLCSLNY 481
            |.....|.:..|..:||:.:.:...|.:         |...::.....:.:|.:.:.::..::.:
Zfish  1516 LSAWHNDMFGRNSFLGEIELDLSTWDFNDTERKLLPLKPRNLFIQTTNSLQPSDLKGQMRLAIRF 1580

  Fly   482 LPQ---------AERLTVVIMKARNLDTLQ----EPYVKIYLIQNGKRIKKKKTSITKSDDPTNP 533
            |||         :..:.:.:...:||..::    :||||.:::.:..:..::||.:.|.  .|||
Zfish  1581 LPQISHSKNVPGSGEVHIWVKDCKNLPLIRSPTIDPYVKCFVLPDTSKKSRQKTRVLKR--TTNP 1643

  Fly   534 IWNEAFTFN-LQSNYLHNAAIEIYVVGAGSEAT-EIGCCGLGPQESGTGCQH-----WHDMINNA 591
            |:|....:: .::..|..|.:|:.|......|: .:|...||   .|||..:     |.|   :.
Zfish  1644 IFNHTMVYDGFRAEDLKEACVELTVWDRDRLASHSLGGLRLG---MGTGRSYGVQVDWMD---ST 1702

  Fly   592 RKPTAMW 598
            .:..|:|
Zfish  1703 TEEVALW 1709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 PHA03307 39..>267 CDD:223039 47/223 (21%)
C2 341..463 CDD:472691 27/132 (20%)
C2B_Synaptotagmin 473..601 CDD:175975 32/146 (22%)
sytl2bXP_701277.6 PHD_SF 5..>47 CDD:473978
C2 1429..1553 CDD:472691 26/123 (21%)
C2B_SLP_1-2-3-4 1571..1727 CDD:175987 32/147 (22%)
Blue background indicates that the domain is not in the aligned region.

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