DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and sytl2b

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_701277.6 Gene:sytl2b / 572466 ZFINID:ZDB-GENE-121214-363 Length:1737 Species:Danio rerio


Alignment Length:592 Identity:118/592 - (19%)
Similarity:225/592 - (38%) Gaps:149/592 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 HILPIGEGSTTPPPQPMTPPPSASSVTSTTSGIGSVSAGSVSDSCDLPTDSEEVAIAKECQPIQP 127
            |.|.|.|..:.     .||||.|..|....              |...|.|.|...:.:|.|::.
Zfish  1211 HYLGISEDKSM-----YTPPPVAEQVDDFI--------------CTSFTSSPETNHSCKCPPVKT 1256

  Fly   128 ASQLHG------MHGGMGLNHHHMGTVSATGTDILRG-----------PAEVFHSPLHLHHQSRS 175
            ::.:||      ..|.:|   ||:.|  .|..:|::|           .|....|...::|:|  
Zfish  1257 STPVHGSPDLQTRSGSLG---HHLTT--QTDGNIIKGIQNRENESLIQKALKRASSRPVYHKS-- 1314

  Fly   176 FPPRLQRTPSISSQSS--VDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARS-PSPM 237
                ::...||:.|..  ..:....|..:..||..::|      |...::|.....|::| ||.:
Zfish  1315 ----MEDISSIARQDQKLKQTDDYMHDNYDASSTHLQT------SFSTADPEHMKKLSKSVPSFL 1369

  Fly   238 RTISLDARCGSPAHSADPGDLRTPSPSQSSL-----ASLAGGSGMGGSSAGKGVAGGRCLSPLLI 297
            .            ..:|.|:..:.|.|:.|:     ......|...||::...|:|         
Zfish  1370 E------------KESDGGESDSESSSRGSVPKWNNRQFTNLSNYSGSTSLSSVSG--------- 1413

  Fly   298 PPRSQPGVDPAMGPASPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFDLTVHLI 362
                        ..||                ||.:...|....|.:...:.|.:.|.:..:.::
Zfish  1414 ------------SVAS----------------VYTSDYNSVDVQGSIQFSLNYVHKLREFHIFVV 1450

  Fly   363 EAHNLSPIEEGGFR-DPYVRLMLQPE-VDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQGKELI 425
            :..||:.::....| ||||:..|.|: .:..||:|.:.:...||.:::..::.|..:.|..:.|.
Zfish  1451 QCQNLAAVDAKRNRSDPYVKSYLIPDPANLGKRKTAVKKKTLNPTYNEILRYRVRMEYLTSQVLN 1515

  Fly   426 LQVLDYDRYSHNDIIGEVRISVDGLDLS---------KSVEIWGDLLRTKKPKEDRPELLCSLNY 481
            |.....|.:..|..:||:.:.:...|.:         |...::.....:.:|.:.:.::..::.:
Zfish  1516 LSAWHNDMFGRNSFLGEIELDLSTWDFNDTERKLLPLKPRNLFIQTTNSLQPSDLKGQMRLAIRF 1580

  Fly   482 LPQ---------AERLTVVIMKARNLDTLQ----EPYVKIYLIQNGKRIKKKKTSITKSDDPTNP 533
            |||         :..:.:.:...:||..::    :||||.:::.:..:..::||.:.|.  .|||
Zfish  1581 LPQISHSKNVPGSGEVHIWVKDCKNLPLIRSPTIDPYVKCFVLPDTSKKSRQKTRVLKR--TTNP 1643

  Fly   534 IWNEAFTFN-LQSNYLHNAAIEIYVVGAGSEAT-EIGCCGLGPQESGTGCQH-----WHDMINNA 591
            |:|....:: .::..|..|.:|:.|......|: .:|...||   .|||..:     |.|   :.
Zfish  1644 IFNHTMVYDGFRAEDLKEACVELTVWDRDRLASHSLGGLRLG---MGTGRSYGVQVDWMD---ST 1702

  Fly   592 RKPTAMW 598
            .:..|:|
Zfish  1703 TEEVALW 1709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 27/132 (20%)
C2B_Synaptotagmin 473..601 CDD:175975 32/146 (22%)
sytl2bXP_701277.6 PHD_SF 5..>47 CDD:304600
C2 1429..1553 CDD:301316 26/123 (21%)
C2B_SLP_1-2-3-4 1571..1727 CDD:175987 32/147 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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