DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and syt16

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_009305785.1 Gene:syt16 / 558725 ZFINID:ZDB-GENE-090313-210 Length:582 Species:Danio rerio


Alignment Length:598 Identity:136/598 - (22%)
Similarity:222/598 - (37%) Gaps:137/598 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 SASSVTSTTSGIG-SVSAGSVSDSCDLPTDSEEVAI-AKECQPIQPASQLHGMHGGMGLNHHHMG 146
            :..||...:|.:. .|..|||.||   ..|..:.|: |:...||  :.:...:..|..|  ....
Zfish    35 TVDSVKDESSEVNLRVVHGSVVDS---QGDKFDYALSAERLTPI--SEETDELESGRSL--LTSD 92

  Fly   147 TVSATGTDILRGPAEVFHSPLHLHHQSRSFPPRLQRTPSISS---QSSVDSAPSRHSGHR----- 203
            ||::.|.|     .|:..|.......::.|...:.|:.|..|   :.:..:||.:|  |:     
Zfish    93 TVNSYGDD-----GEISSSSDSDDELAKHFEISVSRSQSFRSGVTEINPQNAPGQH--HKFNRLL 150

  Fly   204 -----GSS----------PQIRTFGP--DGRSSLPSEPGFPHHLARSPSPMRTISLDARCGSPAH 251
                 ||:          ..:::|..  ..|..:.|||..|  |::||.|               
Zfish   151 SDQEEGSTEPSDCEEAERKSVQSFQDPLTSRRRVGSEPRDP--LSQSPLP--------------- 198

  Fly   252 SADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRSQPGVDPAMGPASPLG 316
                 :.|||:   ..|:.:|....:|....|.|      |..|   ||.......::|..:|..
Zfish   199 -----EGRTPT---DPLSLMAEQISVGSQDTGDG------LEAL---PRDDGSRLGSVGRQTPQR 246

  Fly   317 ALQPDLYR-------------MPDGPVYLTAPESSHAVGRL----HLRVKYDY--HLFDLTVHLI 362
            :|..|...             .|:....|:.|.||...|.:    .|.:..||  ....|.|.:|
Zfish   247 SLAMDNQGYDNSDVTESFPTWSPEHDQSLSHPLSSSPRGHISVCGDLIIALDYRAETHRLLVTVI 311

  Fly   363 EAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTH---IHRGESNPYFDQHFKF------------ 412
            .|..:......|.....|.::|.|    .|||.|   :.:| |.|.|::.|:|            
Zfish   312 MAQGIPDKARSGMDSWQVHVVLLP----GKRQRHKTAVQKG-SMPMFEETFRFSHLEPGDLPSSA 371

  Fly   413 ---------PVSRDQLQGKELI-LQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDLLRT-- 465
                     .::|:::.|:.|. |..|.:.......::.|.|.::..:|...|:....|...:  
Zfish   372 LRFRLYALGKMNRERMMGETLYRLSRLKHTGRFETTLVLEPRSNLKTVDAQTSLSTQTDSASSSL 436

  Fly   466 KKPKEDRPELLCSLNYLPQAERLTVVIMKA---RNLDTLQEP--YVKIYLIQN-GKRIKKKKTSI 524
            .......||||..|:|.....||:|.|:|.   ||....:.|  :.|:.|:.: |:.|.:.||||
Zfish   437 SVSHAGNPELLLGLSYNATTGRLSVEIIKGSHFRNFAVNRPPDTFGKLTLLNSMGQEISRCKTSI 501

  Fly   525 TKSDDPTNPIWNEAFTFNLQSNYLHNAAIEIYVVGAGSEATE--IGCCGLGPQESG-TGCQHWHD 586
            .:|.  .||::.|.|.|.:....|.:..:.:.:....:...:  ||...||...|| ....||.|
Zfish   502 RRSQ--PNPVFKETFVFQVALFQLSDVTLMVSIYNRRNMKRKEMIGWVALGQNSSGEEELLHWQD 564

  Fly   587 MINNARKPTAMWH 599
            |..:..:....||
Zfish   565 MKESGNQQVCRWH 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 32/152 (21%)
C2B_Synaptotagmin 473..601 CDD:175975 41/136 (30%)
syt16XP_009305785.1 C2A_Synaptotagmin-14_16 289..412 CDD:176035 26/127 (20%)
C2B_Synaptotagmin-14_16 444..580 CDD:176053 41/136 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.