DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and syt13

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_017212345.2 Gene:syt13 / 550345 ZFINID:ZDB-GENE-050417-135 Length:530 Species:Danio rerio


Alignment Length:285 Identity:94/285 - (32%)
Similarity:142/285 - (49%) Gaps:36/285 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 SSHAVGRLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHR-- 399
            ||....:||..:.......:|.::::||.|:| :|.|  .:.|:...:....:.:...|.:|:  
Zfish   256 SSILYPKLHFSISLHKESGELHINIVEAENIS-VEAG--CEGYISGCVSVSEEQKHAHTAVHKLA 317

  Fly   400 -----GESNPYFDQHFKFPV----SRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLSKS 455
                 ||     :..|..|:    ..|.|.| |:.|.:...||:|||..:|.:|..:..:.:...
Zfish   318 VHVQWGE-----ELVFALPMESTEDTDSLDG-EVALSLHCCDRFSHNSTLGMMRFKLADVSMMLD 376

  Fly   456 VEIWGDLLRTKKPKED----RPELLCSLNYLPQAERLTVVIMKARNL--DTLQEPY---VKIYLI 511
            .:.|.||   :.||::    ..|||.||:|||.|.||.||:||||.|  |.|::..   ||:.|.
Zfish   377 ADCWVDL---QPPKQEVTSSTGELLLSLSYLPAANRLGVVVMKARGLQSDKLKDNIDLSVKLTLK 438

  Fly   512 QNGKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSNYLHNAAIEIYVVGAGSEAT--EIGCCGLGP 574
            ....::|||:|...|  ...||:|||.....|.|..|..:::::.|:...|..|  .:|.|.||.
Zfish   439 HQNAKLKKKQTRRVK--HKMNPVWNEMMMLELPSELLAKSSVDLEVLNLASPGTLLPLGRCMLGL 501

  Fly   575 QESGTGCQHWHDMINNARKPTAMWH 599
            |.||||.|||..|::|.||..||||
Zfish   502 QTSGTGLQHWKQMLDNPRKQIAMWH 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 30/132 (23%)
C2B_Synaptotagmin 473..601 CDD:175975 59/134 (44%)
syt13XP_017212345.2 C2A_Synaptotagmin-13 261..383 CDD:176059 29/130 (22%)
C2B_Synaptotagmin-13 394..529 CDD:176052 59/135 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594705
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

Return to query results.
Submit another query.