DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and Syt10

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_061273.1 Gene:Syt10 / 54526 MGIID:1859546 Length:523 Species:Mus musculus


Alignment Length:517 Identity:146/517 - (28%)
Similarity:224/517 - (43%) Gaps:91/517 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 ECQPIQPASQLHGMHGGMGLNHHHMGT----------VSATGTDILRGPAEVFHSPLHLHHQSRS 175
            :|..|.||.: .|..||        ||          ||..|..:|.....||........:|:.
Mouse    33 KCSGIFPADR-SGQGGG--------GTDISVSLLAVVVSFCGLALLVVSLFVFWKLCWPCWKSKL 88

  Fly   176 FPPRLQRTPSISSQSSVDSAPS-------RHSGHRGSSPQIRTFGPDGRSS-----LPSE--PGF 226
            ..|.|...|     .|:.|||:       :........|..:...|..:.|     :|:|  ...
Mouse    89 VAPNLSVLP-----QSISSAPTEVFETEEKKEVEENEKPAPKAIEPAIKISHTSPDIPAEVQTAL 148

  Fly   227 PHHLARSPSPMRTISLDARCGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKGVAGGRC 291
            ..||.:.....|..:      .|..|:.....|...|.|.:::|:....|               
Mouse   149 KEHLIKHARVQRQTT------EPTSSSRHNSFRRHLPRQMNVSSVDFSVG--------------- 192

  Fly   292 LSPLLIPPRSQPGVDPAMGPASPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFD 356
            ..|:|     |.|     ...:.:|.::|:||:...........:.....|:|:..::|||....
Mouse   193 TEPIL-----QRG-----ETRTSIGRIKPELYKQKSVDSEGNRKDDVKTCGKLNFALQYDYENEL 247

  Fly   357 LTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQG 421
            |.|.:|:|.:|...:..|..||||::.|.|: ..:|.||.:||...||.||:.|:|||..|||..
Mouse   248 LVVKIIKALDLPAKDFTGTSDPYVKIYLLPD-RKKKFQTRVHRKTLNPLFDELFQFPVVYDQLSN 311

  Fly   422 KELILQVLDYDRYSHNDIIGEVRISVDGL----DLSKSVEIWGDLLRTKKPKEDRPELLCSLNYL 482
            ::|...:.|:||:|.:|:||||  .:|.|    |||:...:|.|:........|..|::.||.||
Mouse   312 RKLHFSIYDFDRFSRHDMIGEV--ILDNLFEVSDLSREATVWKDIHCATTESIDLGEIMFSLCYL 374

  Fly   483 PQAERLTVVIMKARNLDTL-----QEPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFN 542
            |.|.|:|:.::|.|||..:     .:||||:.|:..|:|:||:||:..|  :..||::|||..|:
Mouse   375 PTAGRMTLTVIKCRNLKAMDITGSSDPYVKVSLMCEGRRLKKRKTTTKK--NTLNPVYNEAIIFD 437

  Fly   543 LQSNYLHNAAIEIYV-----VGAGSEATEIGCCGLGPQESGTGCQHWHDMINNARKPTAMWH 599
            :....:...::.|.|     ||...   .||.|..|....|.|..||::|:...|||...||
Mouse   438 IPPENVDQVSLCIAVMDYDRVGHNE---VIGVCRTGLDAEGLGRDHWNEMLAYHRKPITHWH 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 50/125 (40%)
C2B_Synaptotagmin 473..601 CDD:175975 49/137 (36%)
Syt10NP_061273.1 Cysteine motif. /evidence=ECO:0000250|UniProtKB:O35681 13..35 0/1 (0%)
C2A_Synaptotagmin-1-5-6-9-10 231..356 CDD:176031 50/127 (39%)
C2B_Synaptotagmin-3-5-6-9-10 365..498 CDD:176048 49/137 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.780

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