DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and sytl2

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_012812257.2 Gene:sytl2 / 493264 XenbaseID:XB-GENE-945155 Length:2036 Species:Xenopus tropicalis


Alignment Length:642 Identity:125/642 - (19%)
Similarity:220/642 - (34%) Gaps:200/642 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 ASSVTSTTSGIGSVSAGSVSDSCDL--PTDSEEVAIAKECQPIQPASQ-----LHGMHG-GMGLN 141
            :|||...::.:.....|..:.|.||  .||.||:. |:|....:|.||     :..|.. .:.::
 Frog  1438 SSSVDGASAAVIGDIIGKDAASLDLHQHTDEEEIG-AREWNWEEPESQDNPTFISNMPSRDVVIS 1501

  Fly   142 HHHMGTVSA-------------------TGTDILRGPAEVFHSPLH--LHHQSRS---------- 175
            .....|:.:                   .|:...|.|.:::.:..:  |...|.|          
 Frog  1502 KKVYSTIESLPSYKDKENNLDRLTEPQEQGSTTQRKPQDLYFAARYEVLDKNSGSDQSGSVTESS 1566

  Fly   176 ----FPPRLQRTPSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPSP 236
                :......:|..|.::|:|  |.:  |...|.|.:|........:||            |.|
 Frog  1567 GNLLYKKPESESPDASKRNSID--PKQ--GIEESDPILRALKRSSTKTLP------------PLP 1615

  Fly   237 MRTISL------------------------DARCGSPAHSADPGDLR-----TPS---------- 262
            ::.:||                        |......:|.:||..|:     .||          
 Frog  1616 VQEVSLEKSNQDDITVPKEDRDHTYEEVRADKVVPERSHFSDPEKLKRLSQSVPSFLNDDTDGRE 1680

  Fly   263 ---------------PSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRSQPGVDPAMGPA 312
                           .|.|||.:|:|.|||...|:    ..|..:|                   
 Frog  1681 TDSASESSFQLGRHKKSPSSLTNLSGSSGMASLSS----VSGSVMS------------------- 1722

  Fly   313 SPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGGFR- 376
                     :|....|.|.:.        |.:...:.|..:|.:..|.:.:..:|:..:....| 
 Frog  1723 ---------IYSGDFGNVDIK--------GNIQFALDYADNLQEFQVFVSQCKDLAAADVKKQRS 1770

  Fly   377 DPYVRLMLQPE-VDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDII 440
            ||||:..|.|| ....||:|.:.:...||.::...::.:|::.|..:.|.|.|..:|....|..:
 Frog  1771 DPYVKAYLLPEKAKMGKRKTGVKKKTLNPVYNDVLRYKISKNALLSQTLNLSVWHHDVLGRNSFL 1835

  Fly   441 GEVRISVDGLDLSKSVEIWGDLLRTKKPK-----EDRPELLCSLNYLPQA---------ERLTVV 491
            |||.:::...|.|.....|.. |:.:.|.     |:|.|:..:|.|:|:|         ..:.:.
 Frog  1836 GEVDVNLASWDWSNKQMNWYP-LQPRTPAAGIGLENRGEMKLALKYVPEAFTGAKNAGTGEVHIW 1899

  Fly   492 IMKARNLDTLQ----EPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFN-LQSNYLHNA 551
            :.:..||..|:    ..::|..::.:..|..::||...  |...||.:|....:: .:...|..|
 Frog  1900 LKECTNLPMLRGNKINSFIKCTILPDTSRKSRQKTRAV--DKTPNPYFNHTMVYDGFRKEDLKEA 1962

  Fly   552 AIEIYV---------------VGAG---SEATEIGCCGLGPQESGTGCQHWHDMINN 590
            .:|:.|               :|.|   |..|.:........|:.|    |..||.:
 Frog  1963 CVELTVWDHNKLTNHFLGGLRIGLGTGKSYGTPVDWMDSNAAEATT----WEKMITS 2015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 31/123 (25%)
C2B_Synaptotagmin 473..601 CDD:175975 29/150 (19%)
sytl2XP_012812257.2 PHD_SF 5..>44 CDD:419867
C2A_SLP-1_2 1734..1858 CDD:176039 31/132 (23%)
C2B_SLP_1-2-3-4 1871..2027 CDD:175987 30/151 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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