DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and DH11.5

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001254131.1 Gene:DH11.5 / 3565199 WormBaseID:WBGene00008438 Length:825 Species:Caenorhabditis elegans


Alignment Length:688 Identity:145/688 - (21%)
Similarity:223/688 - (32%) Gaps:224/688 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 TTPPPQPMTPPPSASSVTSTTSGI--------------GSV-SAGSVSDSCDL--------PT-- 111
            |..|.|.::||.:.:..|:..|.|              |:| :.|..|.||||        |:  
 Worm   201 TCSPTQKISPPVTPTKKTTMASQIKNKIFGKKKDASASGNVYNNGEYSQSCDLINGRSRKSPSTT 265

  Fly   112 ------------DSEEVAIAKE-------CQ-------PIQPASQLHGMH----------GGMGL 140
                        :..|..:.:|       |:       ||. :|:..|::          ..:||
 Worm   266 NDSGRGSQGHLEEKMEAMVIEEHLENDCGCEEEEEIDAPIL-SSKRSGINRHRTSSCPDITSLGL 329

  Fly   141 NHHHMGTVSATG--------TDILRGPAEVFHSP---------LHLHHQSRSF-PPRLQRTP--S 185
            ||......|:.|        ||......|....|         |.....:|.| ..|.|:..  .
 Worm   330 NHPTTSAASSGGKKCPIAVDTDTEEDNFERVKRPCSPISAADCLVERRLNRKFIEQRRQQVAMCH 394

  Fly   186 ISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARS-----PSPMRTISLDAR 245
            |.....|.|..|..|.....:..:..| .|..||:..:    |.|:.:     .|.....||:..
 Worm   395 IDETCDVVSRISTTSRRTAQTEDLADF-DDNASSIILD----HFLSTTELNFDDSDSADFSLNGA 454

  Fly   246 CGSPAHSADPGDLRTPSPSQSSLASL------------AGGSGMGGSSAGKGVAGGRCL---SPL 295
            |........|....|.:..|:.|..|            ...:.:..:..|.........   |.:
 Worm   455 CEDEFDEPAPSSSNTATSVQTDLTLLNVEQEISEYLEHCRDASVNITEEGMNFIAKHFFEYQSFM 519

  Fly   296 LIP---------PRSQPGVDPAMG--PASPL---------GALQPDLYR--MPDGPVYLTAPESS 338
            .||         |.||.|.||:||  |.:.|         ||....::|  .|:|..|..|.:..
 Worm   520 NIPHKAVHLHKVPASQAGTDPSMGWAPKNMLKAGKHQPAPGARANRVHRDPRPNGTKYGRAGKHE 584

  Fly   339 HAVGRLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHRGESN 403
            |       |...|.|                   |..||..|.               .|:    
 Worm   585 H-------REWGDRH-------------------GELRDEKVA---------------CHK---- 604

  Fly   404 PYFDQHFKFPVSRDQLQGKELILQVLDYDRY--SHNDIIGE--VRISVDGLDL-------SKSVE 457
               |...||..:.|  ||.....:....||.  :..:.:.|  .|.|.:.::|       :|:|.
 Worm   605 ---DAWTKFLANDD--QGARTAFECDFEDRVLATEEETLQEKLCRTSPEAMNLNALYAAANKAVS 664

  Fly   458 IWGDLLRTKKPKEDRPELLCSLNYLPQAERLTVVIMKARNLDTLQEPYVKIYLIQNGKRIKKKKT 522
            ..||:.          |||..|.|.|..:.:|..:.||:.|.....|:.:|.|.:..:.:::|:|
 Worm   665 CGGDVC----------ELLTILTYAPTVQFVTTTVKKAKALPYNNAPFARIMLFEGRRLMEQKQT 719

  Fly   523 SITKS----------------------DDPTNPIWNEAFTFNLQSNYLHNA--AIEIYVVGAGSE 563
            ::..|                      |:|::..::|:|.|::....|..:  .||:|.......
 Worm   720 TVNPSLVHKSSVDGSKPSSSSASTSSNDNPSDVSFSESFLFHVPPTKLDRSHIVIELYDHDDEGG 784

  Fly   564 ATEIGCCGLGPQESGTGCQHWHDMINNARKPTAMWHYI 601
            ..:||.|.:|....|||..||..|:.....|..|||.|
 Worm   785 LQKIGHCVIGRLVDGTGNAHWIQMVRQHGLPVCMWHKI 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 24/132 (18%)
C2B_Synaptotagmin 473..601 CDD:175975 39/151 (26%)
DH11.5NP_001254131.1 C2B_Synaptotagmin 671..822 CDD:175975 39/150 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.