DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and Syt15

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_853663.2 Gene:Syt15 / 306285 RGDID:727964 Length:422 Species:Rattus norvegicus


Alignment Length:452 Identity:114/452 - (25%)
Similarity:180/452 - (39%) Gaps:107/452 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 PRLQRTPSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGF--PHHLARSPSPMR-- 238
            |....|.:.||.|..:..|.|::|    .|.:|         |||.|..  |.|..|....:.  
  Rat    40 PETADTATSSSFSKKEERPCRYAG----IPSVR---------LPSVPFVVPPSHQGRDWVRLHGG 91

  Fly   239 --TISLDARCGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRS 301
              .::....|..|.|..     .|.||                       |.|:...||.:    
  Rat    92 DWAVAPQDPCPVPEHIT-----CTSSP-----------------------AAGQTSLPLCV---- 124

  Fly   302 QPGVDPAMGPASPLGALQPDLYR---------MPDGPVYLTAPESSHAVGRLHLRVKYDYHLFDL 357
                         :|::.|:||:         .|||           .:|||...|:|......|
  Rat   125 -------------MGSINPELYKSSEDVSEAGFPDG-----------CLGRLWFSVEYQQESERL 165

  Fly   358 TVHLIEAHNLS-PIEEGGFRDPYVRLMLQPEVDSRK-RQTHIHRGESNPYFDQHFKFPVSRDQLQ 420
            .|.||:|.:|. |.|.   ....|:|.|.|  |.|: .|:...|...||.||:.|.|.||...:.
  Rat   166 LVDLIKAQHLQVPAET---CSTLVKLHLLP--DKRRFLQSKAKRKTCNPQFDESFIFQVSSKSVA 225

  Fly   421 GKELILQVLDYDRYSHNDIIGEVRISVDGLDLS--KSVEIWGDL-LRTKKPKEDRPELLCSLNYL 482
            .:.|...|...::...:.::|:|...:....|:  :...||.|| ....:|..:..:|...|:|.
  Rat   226 QRVLKFSVYHVNKQRKHQLLGQVLFPLKNETLAGDRHRVIWRDLEAENLEPLSEFGDLQFCLSYN 290

  Fly   483 PQAERLTVVIMKARNLDTLQEP------YVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTF 541
            ....|||||:::|:.|. |||.      :||:.|:.:.|.:|.|:||.....  .||::||.|:|
  Rat   291 DYLSRLTVVVLRAKGLQ-LQEDRGVVSVFVKVSLMNHNKFVKCKRTSAVLGS--VNPVYNETFSF 352

  Fly   542 NLQSNYLHNAAIEIYV--VGAGSEATEIGCCGLGP--QESGTGCQHWHDMINNARKPTAMWH 599
            ...:|.|..|::.:.|  :..|.::..:|...:||  ...|...:||::|:...::....||
  Rat   353 KADANELDTASLSLVVLQITEGDKSYPLGRVVVGPYMYTRGKELEHWNEMLRKPKELVKRWH 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 38/126 (30%)
C2B_Synaptotagmin 473..601 CDD:175975 41/137 (30%)
Syt15NP_853663.2 C2A_Synaptotagmin-15-17 150..270 CDD:176036 37/124 (30%)
C2B_Synaptotagmin-15 280..417 CDD:176054 41/138 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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