DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and tcb3

DIOPT Version :10

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_593974.1 Gene:tcb3 / 2542267 PomBaseID:SPAPYUK71.03C Length:1225 Species:Schizosaccharomyces pombe


Alignment Length:493 Identity:105/493 - (21%)
Similarity:165/493 - (33%) Gaps:162/493 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KRIESWSRMAKERVGAVRRVTLDRNSA---DE--GTP---------------SGSGASSTAGGNG 58
            |:.:|::|:........|.|.:..|..   ||  ..|               :.||.....|...
pombe   723 KKCDSYARIMSHNTKQFRTVVIASNVNPFWDEYMYAPVITKHDIFFLQVMNYNSSGEDKLIGQTP 787

  Fly    59 VSVVHILPIGEGSTT---PPPQPMTPPPSASSVTSTTSGI-GSVSAGSVSDSCDLPTDSEEVAIA 119
            :::.:.:..||....   ..|:.:|.|      .|:|.|| |:   .:::..||....:...:::
pombe   788 INISNFINQGENGALMEYHDPRELTVP------LSSTRGIKGN---ATITFKCDFFPSAVTTSLS 843

  Fly   120 KECQPIQPASQLHGMHGGMGLNHHHMGTVSATGTDILRGPAEVFHSPLHLHHQSRSFPPRLQRTP 184
            .:..|...||                   |...||.:.  .||.              |..|:||
pombe   844 PDVTPAPKAS-------------------STVATDKVN--IEVL--------------PESQKTP 873

  Fly   185 SISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSL--PSEP------------GF--------- 226
                 ::||:.    |..|||: .::|..|...|.|  |||.            ||         
pombe   874 -----TAVDNT----STSRGST-SVKTSKPKKISELLMPSEAVNAALDFESGFMGFDIISYKIAK 928

  Fly   227 ------------PHHLARSPSPMRTISLDARCGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGG 279
                        |||:..|.      :|:...|:..|......:|....||.:...|.|...:|.
pombe   929 PAQELAIFLDDLPHHIFLSS------ALNVTGGATLHEYGNTFIRQLEYSQCTFKLLDGDKEVGS 987

  Fly   280 SSAGKGVAGGRCLSPLLIPPRSQPGVDPAMGPASPLGALQPD------LYRMPDGPVYLTAPESS 338
            .:         .||..||          :.|...||....||      .:|:...||.|...|..
pombe   988 KT---------MLSRDLI----------SKGATKPLEIAFPDGASILVAFRLTPVPVKLEEVEMY 1033

  Fly   339 HAVGRLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHRGESN 403
            ..:|             ::||.:|:|.:|...:..|..||:|...||.|...|   |..|:...|
pombe  1034 ENMG-------------EMTVDVIKATDLPAADSNGKSDPFVVFELQGEEVYR---TKTHKRTLN 1082

  Fly   404 PYFDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIG 441
            |.|::.|:  |.....|....:..|.|:|..:.:|.:|
pombe  1083 PTFNESFE--VELPCKQTCNFVANVFDWDFGNKDDHLG 1118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 PHA03307 39..>267 CDD:223039 55/286 (19%)
C2 341..463 CDD:472691 27/101 (27%)
C2B_Synaptotagmin 473..601 CDD:175975
tcb3NP_593974.1 COG5038 1..1225 CDD:227371 105/493 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.