DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and tcb1

DIOPT Version :10

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_587865.1 Gene:tcb1 / 2539288 PomBaseID:SPCC962.01 Length:1429 Species:Schizosaccharomyces pombe


Alignment Length:227 Identity:46/227 - (20%)
Similarity:92/227 - (40%) Gaps:36/227 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 LTVHLIEAHNLSPIEEGGFR-DPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQ 420
            :.:.:|:|::|..:|....: |||.|:::...|.:|...|   ....||.:::....|:..|.  
pombe   759 MRLSVIKANDLVNVELPTRKSDPYARVIVGNSVVARTVYT---PNNLNPIWNEILYVPIMADT-- 818

  Fly   421 GKELILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDLLRTKKPKEDRPELLCSLNYLPQA 485
             |.:.|:.:||:...::..:|...|:|.            ..:|..| :.||..|..::....:.
pombe   819 -KTIDLEAMDYEESGNDRSLGYASINVQ------------KYIRNAK-RLDRSALASTVFGTSEV 869

  Fly   486 ERLTVVIMK---ARNLDTLQEPYVKIYLIQNGKRIKKKKTSITKSDDPTNPI----WNEAFTFNL 543
            ..||:...|   .|...::...|.....:......|:...::..:.|||.|.    .:.|.|.::
pombe   870 NALTLTSRKGQSVRGTISVNCDYRPCLRLNTDNSSKQSSENVQSATDPTTPAKDNSTSNAETSSI 934

  Fly   544 QSNYLHNAAIE-------IYVVGAGSEATEIG 568
            .|....|.|::       |.:|.|  :..::|
pombe   935 TSVISVNEALQYPSGFALISIVSA--DLQDVG 964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 PHA03307 39..>267 CDD:223039
C2 341..463 CDD:472691 22/106 (21%)
C2B_Synaptotagmin 473..601 CDD:175975 20/110 (18%)
tcb1NP_587865.1 COG5038 45..1275 CDD:227371 46/227 (20%)
C2 1332..>1373 CDD:472691
Blue background indicates that the domain is not in the aligned region.

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