DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and Syt16

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001351210.1 Gene:Syt16 / 238266 MGIID:2673872 Length:654 Species:Mus musculus


Alignment Length:619 Identity:137/619 - (22%)
Similarity:205/619 - (33%) Gaps:184/619 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GTPSGSGASSTAGGNGVSVVHILPIGEGSTTPPPQPMTPPPSASSVT-----------STTSGI- 95
            |...|||......|.    ..:...|:..     :|.|...|...||           |..||: 
Mouse   153 GRQHGSGTLEKVNGR----KQVNSFGDDE-----EPSTSSESDEDVTKQFKISVSRSQSFRSGVS 208

  Fly    96 --GSVSAGSVSDSCD--LPTDSEEVAIAKECQPIQPASQLHGMHGGMGLNHHHMGTVSATGTDIL 156
              |..:.......|.  |.|..|:.|....|:.|. .|.||...|.:              .|:.
Mouse   209 EKGKTTELEQKIKCKRLLCTHQEDSAEGSACEGIH-CSALHCRQGQV--------------NDLD 258

  Fly   157 RGPAEVFHSPLHLHHQSRSFPPRLQRTPSISSQSSVDSAPSRHSGH-RGSSPQIRTFG-PDGRSS 219
            | .:::.:|.: |.::.|..        ||..||..:|...||.|. |.....:|:.| |.....
Mouse   259 R-TSQLSYSEI-LSYEDRPI--------SILPQSPFESRNVRHHGPCRPEMGMVRSLGRPCADGV 313

  Fly   220 LPSEPGFPHHLARSPSPMRTISLDARCGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGGSSAGK 284
            |.:|..|             :|.........||                :||.......|:|   
Mouse   314 LETETAF-------------VSRGFEDSYATHS----------------SSLWSPEEQDGTS--- 346

  Fly   285 GVAGGRCLSPLLIPPRSQPGVDPAMGPASPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVK 349
                      |.:|.|       .:.|.|..|.|.                            |.
Mouse   347 ----------LQVPHR-------LLEPISKCGDLD----------------------------VI 366

  Fly   350 YDYHLF--DLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHFKF 412
            ::|...  .|||.::.|..|...:..|.....|.::|.|....|.: |:|.|| .||.|.:...|
Mouse   367 FEYRAVTQKLTVTIVRAQGLPDKDRSGVNSWQVHIVLLPSKKQRGK-TNIQRG-PNPVFKEKVTF 429

  Fly   413 ---------------------PVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISV-----DGLD 451
                                 .::|:::.|::|..       .||....||:::::     ..|.
Mouse   430 TKLEPRDVASCAVRFRLYAARKMTRERMMGEKLFC-------LSHLHPEGEMKVTLVLEPRSNLS 487

  Fly   452 -----LSKSVEIWGDLLRTKKPKEDR--PELLCSLNYLPQAERLTVVIMKA---RNLDTLQEP-- 504
                 ||.||....|...:.:.....  ||||..|:|.....||:|.::|.   |||...:.|  
Mouse   488 SGESPLSPSVVSHSDSASSTQSLSHGGVPELLVGLSYNATTGRLSVEMIKGSHFRNLAANRAPDT 552

  Fly   505 YVKIYLIQ-NGKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSNYLHNAA--IEIYVVGAGSEATE 566
            |.|::|:. .|:.:.:.||||.:..  .||::.|.|.|.:....|.:..  |.||..........
Mouse   553 YGKLFLLNCVGQEMSRCKTSIRRGQ--PNPVYKETFVFQVALFQLSDVTLMISIYSRRTMKRKEM 615

  Fly   567 IGCCGLGPQESGTGCQ-HWHDMINNARKPTAMWH 599
            ||...||...||...| ||.:|..:..:.|..||
Mouse   616 IGWVALGQNSSGEEEQEHWEEMKESKGQQTCRWH 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 33/154 (21%)
C2B_Synaptotagmin 473..601 CDD:175975 44/136 (32%)
Syt16NP_001351210.1 C2A_Synaptotagmin-14_16 359..482 CDD:176035 29/159 (18%)
C2B_Synaptotagmin-14_16 515..652 CDD:176053 44/137 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.