DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and RPH3A

DIOPT Version :10

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001137326.1 Gene:RPH3A / 22895 HGNCID:17056 Length:694 Species:Homo sapiens


Alignment Length:557 Identity:140/557 - (25%)
Similarity:223/557 - (40%) Gaps:123/557 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 IAKECQPIQPASQLHGMHGGMGLNHHHMGTVSATG-TDILRGPAE-VFHSPLHLHHQSRSFPPRL 180
            :::...|.|||.:           ..|.....|.| ::..|||.: ....|.....:....||..
Human   181 VSEPAAPEQPAPE-----------PKHPARAPARGDSEDRRGPGQKTGPDPASAPGRGNYGPPVR 234

  Fly   181 QRTPSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPSPMRTISLDAR 245
            :.:.:..|.||.||....|||..|.|                        :|||:.:|..: ..:
Human   235 RASEARMSSSSRDSESWDHSGGAGDS------------------------SRSPAGLRRAN-SVQ 274

  Fly   246 CGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKGVAGGRCLSP----LLIPPRSQ---- 302
            ...||    ||.:::|:|.|.......|||..|...||:.......::|    ...|||.:    
Human   275 ASRPA----PGSVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKPEVAPSDPGTTAPPREERTGG 335

  Fly   303 PGVDPAMG--------PASP-----LGALQPDLYRMPDGPVYLTAPESSH------AVGRLHLRV 348
            .|..||:|        |:.|     ..|.||...|.|..|.......:|:      .:|.|...:
Human   336 VGGYPAVGAREDRMSHPSGPYSQASAAAPQPAAARQPPPPEEEEEEANSYDSDEATTLGALEFSL 400

  Fly   349 KYDYHLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVD-SRKRQTHIHRGESNPYFDQHFKF 412
            .||.....|...:|:|..|.|::..|..||||:|.|.|... |.|.:|...|...||.:::...:
Human   401 LYDQDNSSLQCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVY 465

  Fly   413 -PVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVD---------------------------- 448
             .::.:.:|.|.|.:.|.|.|::.||:.|||.|.|:.                            
Human   466 HGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGS 530

  Fly   449 --GLDL--SKSVEIWGDLLRTKKPKEDRPELLCSLNYLPQAERLTVVIMKARNLDTL-----QEP 504
              |:.|  .:.||..||:       |:|.::|.||.|..|...|.|.|::..:|..:     .:|
Human   531 ARGMALYEEEQVERVGDI-------EERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDP 588

  Fly   505 YVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSNYLHNAAIEI----YVVGAGSEAT 565
            :||::|..:..:..|.||.|.|.  ..||.:||.|.::::.:.|...:::|    |.:|..::  
Human   589 FVKLWLKPDMGKKAKHKTQIKKK--TLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSND-- 649

  Fly   566 EIGCCGLGPQESGTGCQHWHDMINNARKPTAMWHYIR 602
            .||.|.||....|...:||::.:.|..|....||.::
Human   650 YIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQ 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 PHA03307 39..>267 CDD:223039 34/150 (23%)
C2 341..463 CDD:472691 42/155 (27%)
C2B_Synaptotagmin 473..601 CDD:175975 39/136 (29%)
RPH3ANP_001137326.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
FYVE_RP3A 92..171 CDD:277301
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..388 57/246 (23%)
PRK07764 <169..353 CDD:236090 48/211 (23%)
C2A_Rabphilin_Doc2 393..516 CDD:176000 36/122 (30%)
C2B_Rabphilin_Doc2 553..685 CDD:176030 39/135 (29%)
Blue background indicates that the domain is not in the aligned region.

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