DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and Syt4

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_033334.2 Gene:Syt4 / 20983 MGIID:101759 Length:425 Species:Mus musculus


Alignment Length:325 Identity:104/325 - (32%)
Similarity:158/325 - (48%) Gaps:34/325 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 PGVDPAMGPASPLGALQPDLY-------RMPD---GPVYLTAPESSHAVGRLHLRVKYDYHLFDL 357
            |..:|..|.:|.|..:.|.|:       ..|:   ....||:.|....:|.|.|.::|::.....
Mouse   106 PKANPKAGSSSDLENVTPKLFTETEKEANSPESLKSSTSLTSEEKQEKLGTLFLSLEYNFEKKAF 170

  Fly   358 TVHLIEAHNLSPIEEGGF-RDPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHFKF-PVSRDQLQ 420
            .|::.||..|..::|... .|||:::.:.||...|.: |.:.|...:|.||:.|.| .:....:|
Mouse   171 VVNIKEAQGLPAMDEQSMTSDPYIKMTILPEKKHRVK-TRVLRKTLDPVFDETFTFYGIPYPHIQ 234

  Fly   421 GKELILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDLLRTK-------KPKEDRPELLCS 478
            ...|...||.:||:|.:|:||||.|.:.|::||.     |.:|.|:       |....|.|||.|
Mouse   235 ELSLHFTVLSFDRFSRDDVIGEVLIPLSGIELSD-----GKMLMTREIIKRNAKKSSGRGELLVS 294

  Fly   479 LNYLPQAERLTVVIMKARNL-----DTLQEPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEA 538
            |.|......||||::|||:|     ..|.:||||:.|....|||.||||.:.|.  ..|.::||.
Mouse   295 LCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKC--TPNAVFNEL 357

  Fly   539 FTFNLQSNYLHNAAIEIYVVGA--GSEATEIGCCGLGPQESGTGCQHWHDMINNARKPTAMWHYI 601
            |.|::....|...::|..|:.:  ||....||...||....|:|..||.::.:..|:..|.||.:
Mouse   358 FVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQIAKWHML 422

  Fly   602  601
            Mouse   423  422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 39/123 (32%)
C2B_Synaptotagmin 473..601 CDD:175975 50/134 (37%)
Syt4NP_033334.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..147 2/19 (11%)
C2A_Synaptotagmin-4-11 153..279 CDD:176034 41/131 (31%)
C2B_Synaptotagmin-4 288..423 CDD:176049 51/137 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.