DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and Syt17

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_620204.1 Gene:Syt17 / 192189 RGDID:708576 Length:474 Species:Rattus norvegicus


Alignment Length:458 Identity:133/458 - (29%)
Similarity:201/458 - (43%) Gaps:83/458 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 FPPRLQRTPSISSQSSVDSAPSRHSGHRGSSPQI--RTFGPDGRSSLPSEPGFPHHLARSPSPMR 238
            ||  .|..|.:.:..|.|.  ...|.|..|...:  ||..||||.|            .|.:...
  Rat    53 FP--AQTPPWLMASRSNDK--DGDSVHTASDVPLTPRTNSPDGRRS------------SSDTSKS 101

  Fly   239 TISLDARCGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRSQP 303
            |.||..|..|.       |.|.||.....:..:..|                     ::..:.:|
  Rat   102 TYSLTRRISSL-------DSRRPSSPLIDIKPIEFG---------------------VLSAKKEP 138

  Fly   304 GVDPAM-----GPASPLGALQPDLYRMP---DGPVYLTAPE--SSHAVGRLHLRVKYDYHLFDLT 358
             :.|::     .|.......:|.||.:.   |....||..|  |.:.:|.||...:||.....||
  Rat   139 -IQPSVLRRTYTPDDYFRKFEPRLYSLDSNLDDVDSLTDEEIMSKYQLGMLHFSTQYDLLHNHLT 202

  Fly   359 VHLIEAHNL-SPIEEGGFR------DPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHFKFPVSR 416
            |.:|||.:| .||...|.|      :|||::.|.|: ....:||.:.|....|.|::.:.|.:..
  Rat   203 VRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPD-QKNSKQTGVKRKTQKPVFEERYTFEIPF 266

  Fly   417 DQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDLLRTKKPKEDRPELLCSLNY 481
            .:.|.:.|:|.|:|:|::|.:.:||:|.:.:..:||.|....|..|:.:.:.:.:..|||.||||
  Rat   267 LEAQRRTLLLTVVDFDKFSRHCVIGKVAVPLCEVDLVKGGHWWKALIPSSQNEVELGELLLSLNY 331

  Fly   482 LPQAERLTVVIMKARNL---DTLQ--EPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTF 541
            ||.|.||.|.|::|:.|   |..|  :|:|||.|:...|.:|.||||..:.  ..:|.:||:|:|
  Rat   332 LPSAGRLNVDIIRAKQLLQTDVSQGSDPFVKIQLVHGLKLVKTKKTSFLRG--TIDPFYNESFSF 394

  Fly   542 NLQSNYLHNAAIEIYVVGAGSEATE-------IGCCGLGPQESGTGCQHWHDMINNARKPTAMWH 599
            .:....|.||::...|.|...:::.       ||....||.||    .||..|:|..|.....||
  Rat   395 KVPQEELENASLVFTVFGHNMKSSNDFIGRIVIGQYSSGPSES----NHWRRMLNTHRTAVEQWH 455

  Fly   600 YIR 602
            .:|
  Rat   456 SLR 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 41/128 (32%)
C2B_Synaptotagmin 473..601 CDD:175975 52/139 (37%)
Syt17NP_620204.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..117 20/77 (26%)
C2A_Synaptotagmin-15-17 186..314 CDD:176036 42/128 (33%)
C2B_Synaptotagmin-17 323..457 CDD:176055 52/139 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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