DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and Syt12

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_620190.1 Gene:Syt12 / 191595 RGDID:621876 Length:421 Species:Rattus norvegicus


Alignment Length:336 Identity:105/336 - (31%)
Similarity:167/336 - (49%) Gaps:39/336 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 PRSQPG---VDPAMGPASPLGALQPDLYRMPDGPVYLTAPESSHA------------------VG 342
            |.|:.|   ::......|.||.|:. :.|..|...|.|..:|..|                  :|
  Rat    91 PPSRKGSLSIEDTFESISELGPLEL-MGRELDLAPYGTLRKSQSADSLNSISSVSNTFGQDFTLG 154

  Fly   343 RLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHRGESNPY-- 405
            ::.:.:.||.....|.|.:::..:|...||..|...::|:.|.|:    ::...|.|.:.|.|  
  Rat   155 QVEVSMDYDGASHTLHVAVLQGKDLLEREEATFESCFMRVSLLPD----EQIVGISRIQRNAYSI 215

  Fly   406 -FDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLS-KSVEIWGDLLRTKKP 468
             ||:.|..|:....|:.|.|...|...|....|...|.|.:.:..|||. :....|..|....|.
  Rat   216 FFDEKFSVPLDPTALEEKSLRFSVFGIDEDERNVSTGVVELKLSVLDLPLQPFSGWLYLQDQNKA 280

  Fly   469 KEDRPELLCSLNYLPQAERLTVVIMKARNL-----DTLQEPYVKIYLIQNGKRIKKKKTSITKSD 528
            .:...|:|.||:|||.|||||||::||:||     .|..:|:||:||:|:|:::.||||:: |.|
  Rat   281 ADAVGEILLSLSYLPTAERLTVVVVKAKNLIWTNDKTTADPFVKVYLLQDGRKMSKKKTAV-KRD 344

  Fly   529 DPTNPIWNEAFTFNLQSNYLHNAAIEIYVVGAGSE--ATEIGCCGLGPQESGTGCQHWHDMINNA 591
            || ||::|||..|::.:..|.:.::.:.|..:.|:  ...:|...:||..||.|..||:.|:...
  Rat   345 DP-NPVFNEAMIFSVPAIVLQDLSLRVTVAESSSDGRGDNVGHVIIGPGASGMGTTHWNQMLATL 408

  Fly   592 RKPTAMWHYIR 602
            |:|.:|||.:|
  Rat   409 RRPVSMWHPVR 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 32/125 (26%)
C2B_Synaptotagmin 473..601 CDD:175975 57/134 (43%)
Syt12NP_620190.1 C2 152..263 CDD:417471 29/114 (25%)
C2B_Synaptotagmin-12 284..419 CDD:176051 57/136 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10024
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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