DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and sue-1

DIOPT Version :10

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_492083.2 Gene:sue-1 / 184108 WormBaseID:WBGene00006306 Length:537 Species:Caenorhabditis elegans


Alignment Length:418 Identity:89/418 - (21%)
Similarity:140/418 - (33%) Gaps:136/418 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 HRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPSPM-----RTISLDARCGSPAHSAD--PGDLR 259
            |..:.|.:  ..|..|..||..|  ..||.||.||.     ..:|.:.||.|.|...:  |...:
 Worm     8 HLSTYPAL--LEPTCRRRLPMPP--DTHLRRSSSPRILPTPPPLSPEYRCPSAAPHLERRPSGRQ 68

  Fly   260 TPSPSQSSLASLAGGSGMGGSSAGKGVAGGRC-LSPLLIPPRSQPGVDPAMGPASPLGALQPDLY 323
            .|.|..:.|::|.       |.|..|....:| |||:.:.|...|.              :|:.|
 Worm    69 LPRPPTAELSNLT-------SLAHNGPGNSQCSLSPVSLTPDPTPD--------------EPEFY 112

  Fly   324 RMPD----------------------------GPVYLTAPESSHAVGRLHLRVKYDYHLFDLTVH 360
            ...|                            .||.:|.||                        
 Worm   113 EEEDVDESEVVEEDYAQEEEEEGDDGEVVEYEDPVVVTPPE------------------------ 153

  Fly   361 LIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRK-RQTHIHRGESNPYFDQHFKFPVSRDQLQGKEL 424
              |...:||           .:::.|....|: .:..:|    :|..:|    ..|:.....::.
 Worm   154 --EIRRISP-----------EILIAPPPQPRRMSKFSVH----SPSIEQ----ITSKSSSDTEDP 197

  Fly   425 ILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDLLRTKKPKEDRPE----LLCSLNYLPQA 485
            |...||...||.|   ..:.|..:...:.|:     .:..:..|...:|.    |.|||.|....
 Worm   198 IAHGLDPSLYSPN---APIIIENNNTAIHKT-----SVASSSSPTPQQPRGLGLLHCSLLYFAVR 254

  Fly   486 ERLTVVIMKARNLDTLQEPYVKIYLIQN----GKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSN 546
            :||.|.:.|...|....:|.::|:.:..    |.:..|::||.||..  .:|::|..|.|:   |
 Worm   255 KRLRVTVTKIEALAGELKPEMEIHALCKVSIPGLKGGKEQTSETKRG--RDPLFNHEFFFD---N 314

  Fly   547 YLHNAAIEIYVV-------GAGSEATEI 567
            ..|. .::..||       |.|.:..||
 Worm   315 VTHE-ELDTKVVIITACHAGGGIKGKEI 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 PHA03307 39..>267 CDD:223039 21/71 (30%)
C2 341..463 CDD:472691 17/122 (14%)
C2B_Synaptotagmin 473..601 CDD:175975 31/110 (28%)
sue-1NP_492083.2 C2 242..349 CDD:472691 30/106 (28%)
C2 389..513 CDD:472691
Blue background indicates that the domain is not in the aligned region.

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