DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and snt-6

DIOPT Version :10

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001254022.1 Gene:snt-6 / 182427 WormBaseID:WBGene00004926 Length:373 Species:Caenorhabditis elegans


Alignment Length:331 Identity:101/331 - (30%)
Similarity:167/331 - (50%) Gaps:43/331 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 LSPLL--------IPPRSQPGVDPAMGP--ASPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHL 346
            |:|.|        :.|..:..:..::.|  .|.:..|:|::.              |...||::.
 Worm    57 LAPTLTVDMESRKVQPSLKARLSQSINPWKTSIIDQLRPEVV--------------SEFRGRINF 107

  Fly   347 RVKYDYHLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHFK 411
            .|.::.....|.|||:||.:|...:..|..|||||..|..:....:| :.:||...||.|::...
 Worm   108 SVAFEKECSTLHVHLMEAVDLPVKDFTGSSDPYVRAFLLQDPGQSER-SKVHRRNLNPTFNETLS 171

  Fly   412 F-PVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDLLRTKKPKEDRPEL 475
            | ..|..:|....|:|||:||||:|.:|.|||:.:.:..:....|...|..|.|....|:...|:
 Worm   172 FRGHSMKKLHDMTLVLQVMDYDRFSSDDPIGEILLPLKHVKFESSPVYWKHLQRPTVSKDACGEI 236

  Fly   476 LCSLNYLPQAERLTVVIMKARNLDTLQ-----EPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIW 535
            :.||.|||.:.::||.|:|||:|....     :.|||::::|.|.:::|:|||: |...| :||:
 Worm   237 MISLCYLPTSGKITVSIIKARDLHAKDRTRHYDTYVKMWMVQQGNKLEKRKTSV-KPHTP-SPIF 299

  Fly   536 NEAFTFNLQSNYLHNA-------AIEIYVVGAGSEATEIGCCGLGPQESGTGCQHWHDMINNARK 593
            ||:|.|::....:..|       |:|..|:|:..|...:...|||.:.   |.:||.:.:|:..:
 Worm   300 NESFAFSIPVKQVLLAEVNLVLTAMEYDVIGSNEEIGHVIVGGLGSEH---GQRHWSECVNHPEQ 361

  Fly   594 PTAMWH 599
            |.||||
 Worm   362 PVAMWH 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 PHA03307 39..>267 CDD:223039
C2 341..463 CDD:472691 41/122 (34%)
C2B_Synaptotagmin 473..601 CDD:175975 48/139 (35%)
snt-6NP_001254022.1 C2 101..225 CDD:472691 42/124 (34%)
C2B_Synaptotagmin 234..369 CDD:175975 48/139 (35%)
Blue background indicates that the domain is not in the aligned region.

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