DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and snt-5

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_503409.1 Gene:snt-5 / 178631 WormBaseID:WBGene00004925 Length:458 Species:Caenorhabditis elegans


Alignment Length:406 Identity:110/406 - (27%)
Similarity:180/406 - (44%) Gaps:79/406 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 DLRTPSPSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLL-----IPPRSQPGVDPAMGPASPLG 316
            :::...|..:|..|:   |.|.||...:.::...|..|.:     ...||.|...||:...|...
 Worm    51 EIKVSVPQSASTLSI---SKMNGSYRARVLSRNGCSPPWMDRNFETSTRSSPCTSPAIASTSDSC 112

  Fly   317 ALQPD-------------LYRMPDGPVYLTAPE--SSHAV-----------------GRLHLRVK 349
            .|..|             |:.:...|..:...|  ...:|                 |.|...::
 Worm   113 ELLGDDPRSASSMRNSMFLFNVDGNPEVIDEMEDIDERSVMHYELGFYDKTDGGCIRGTLTFALR 177

  Fly   350 YDYHLFDLTVHLIEAHNLSPIEEGGFR-DPYVRLMLQPEVDSRKR---QTHIHRGESNPYFDQHF 410
            ||:....|.:|:|.|:|| |:|:.|.. ||||::.|.||    :|   :|.|.:..::|.|::.|
 Worm   178 YDFIHRVLMLHVIRANNL-PVEDKGVTVDPYVKMYLLPE----RRGHCKTRICKKTNDPEFNEMF 237

  Fly   411 KFPVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEI--WGDL---LRTKKPKE 470
            .|.||.:.|..:.|...|.|:||::.:.:||.:.:.    ||.:..::  |.:.   :...:.|.
 Worm   238 SFDVSFNNLANRMLQFTVYDFDRFTRHGLIGNIIMR----DLFEKSDLYTWTEYTMHIVASQNKN 298

  Fly   471 DRPELLCSLNYLPQAERLTVVIMKARNLDTL-----QEPYVKIYLIQNGKRIKKKKTSITKSDDP 530
            |..:||..|.|..|.|:|.:.:.||.||..:     .:|||||....||||.|.||:|..:::  
 Worm   299 DYGDLLLFLTYSNQEEKLYINVSKAYNLRPMDITGASDPYVKIEQTFNGKRFKSKKSSTKRAN-- 361

  Fly   531 TNPIWNEAFTFNLQSNYLHNAAIEIYVVG---AGSEATEIGCCGLGPQESGT--GCQHWHDMINN 590
            .||:::|...|::.|:.:....|.|.|:.   .|.:.. :|||.|| ::|.|  |...|.:.:|.
 Worm   362 LNPVFHETLVFDIPSSQIAETNILIQVMDWDRIGKDDL-LGCCILG-KDSPTADGKTQWDNCLNA 424

  Fly   591 A-------RKPTAMWH 599
            .       .||...||
 Worm   425 VPEEGQLKNKPVGQWH 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 41/147 (28%)
C2B_Synaptotagmin 473..601 CDD:175975 47/144 (33%)
snt-5NP_503409.1 C2 169..277 CDD:301316 39/116 (34%)
C2B_Synaptotagmin 301..442 CDD:175975 47/144 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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