DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and snt-1

DIOPT Version :10

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_495394.3 Gene:snt-1 / 174120 WormBaseID:WBGene00004921 Length:443 Species:Caenorhabditis elegans


Alignment Length:272 Identity:101/272 - (37%)
Similarity:158/272 - (58%) Gaps:17/272 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 VGRLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHRGESNPY 405
            :||:..::.||:....|||.:|:|.:|..::..|..||||:|.|.|| ..:|.:|.:||...||.
 Worm   160 LGRIQYKLDYDFQQGQLTVTVIQAEDLPGMDMSGTSDPYVKLYLLPE-KKKKVETKVHRKTLNPV 223

  Fly   406 FDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDLLRTKKPKE 470
            |::.|.|.|:.:::..|.|:..:.|:||:|.:|.||:|.|.:..:||...:|.|.|:......||
 Worm   224 FNETFIFKVAFNEITAKTLVFAIYDFDRFSKHDQIGQVLIPLGKIDLGAVIEEWKDIAPPPDDKE 288

  Fly   471 DRPEL--LC-SLNYLPQAERLTVVIMKARNLDT-----LQEPYVKIYLI-QNGKRIKKKKTSITK 526
            ....|  :| ||.|:|.|.:|||||::|:||..     |.:||||:.:. ::.||:|||||:|.:
 Worm   289 AEKSLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKLEMFGEDRKRLKKKKTNIKR 353

  Fly   527 SDDPTNPIWNEAFTFN-LQSNYLHNAAIEIYVVG---AGSEATEIGCCGLGPQESGTGCQHWHDM 587
            .  ..||.:||:|.|: |..:.:...::.|.|:.   .||. ..||.|.||...:|...:||.||
 Worm   354 K--TLNPYFNESFVFDKLPLHKMKKVSLMITVMDYDKLGSN-DAIGRCLLGCNGTGAELRHWMDM 415

  Fly   588 INNARKPTAMWH 599
            :.:.|:|.|.||
 Worm   416 LASPRRPIAQWH 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 PHA03307 39..>267 CDD:223039
C2 341..463 CDD:472691 45/121 (37%)
C2B_Synaptotagmin 473..601 CDD:175975 54/140 (39%)
snt-1NP_495394.3 Syt1_2_N <62..>108 CDD:425364
C2A_Synaptotagmin-1-5-6-9-10 160..282 CDD:176031 45/122 (37%)
C2B_Synaptotagmin-1 293..429 CDD:176047 54/138 (39%)
Blue background indicates that the domain is not in the aligned region.

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