DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and snt-4

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_491853.2 Gene:snt-4 / 172346 WormBaseID:WBGene00004924 Length:381 Species:Caenorhabditis elegans


Alignment Length:390 Identity:112/390 - (28%)
Similarity:172/390 - (44%) Gaps:67/390 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 QSSLASLAGGS----GMGGS---------SAGKGVAGGRCLSPLLIPPRSQPGV----------- 305
            |..||..||..    |:||:         :|...|...|....||:|||....|           
 Worm     5 QEGLAKSAGHEWFYLGVGGAVGLAALVAVAALLAVRKRRQYPSLLLPPRQVIAVRGGFPKGPGGL 69

  Fly   306 -------------DPAMGPASPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFDL 357
                         |....|..||..|..|..|.      |:..|.....|.:...:.||.|...|
 Worm    70 KQSPSPLQSPLSNDSTPSPVVPLQNLLEDRTRK------LSPSELPSERGNISFTLSYDSHTLTL 128

  Fly   358 TVHLIEAHNLSP--IEEGG--FRDPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHF-KFPVSRD 417
            .|.:|...||..  :...|  ..||||:|.|.||.:.|.: |.|.|..::|.:::.| .:.|:.:
 Worm   129 LVSIINCRNLCEMVVSRDGQCLLDPYVKLQLLPEREHRVK-TRIVRSTTSPVYEEQFAMYGVTHE 192

  Fly   418 QLQGKELILQVLDYDRYSHNDIIGE--VRISVDGLDLSKSVEIWGDLL-RTKKPKEDRPELLCSL 479
            |:....|..||:.:||||.:.::||  .|::...|.:...:.:...|| |.......|.|||.||
 Worm   193 QVNFATLHFQVVAFDRYSRDTVVGECVYRLADAELQVHNEMRVELPLLPRATDTVAARGELLLSL 257

  Fly   480 NYLPQAERLTVVIMKARNLD-----TLQEPYVKIYL-IQNGKRIKKKKTSITKSDDPTNPIWNEA 538
            .|......||||::|||.|.     ...:|:||:|| .::|:||.||:|.:.:|  ..||::||:
 Worm   258 TYQAAFNNLTVVVLKARGLGGRNDAGTADPFVKLYLRKESGERIVKKRTHVRRS--TLNPVYNES 320

  Fly   539 FTFNLQSNYLHNAAIEIYVVGAG--SEATEIGCCGLGPQESGTGCQHWHDMINNARKPTAMWHYI 601
            |.|.|..:.|.::.|::.|:...  :....||...|..::|     |..:::.|..:..|.||::
 Worm   321 FVFELPDDRLEHSVIDLQVINHDRVNRNDVIGRALLNMEDS-----HVVEVLENPGRQVAQWHHL 380

  Fly   602  601
             Worm   381  380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 37/128 (29%)
C2B_Synaptotagmin 473..601 CDD:175975 45/135 (33%)
snt-4NP_491853.2 C2A_Synaptotagmin-4-11 111..241 CDD:176034 38/130 (29%)
C2 250..381 CDD:301316 46/138 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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