DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and Y48G8AR.2

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_490838.3 Gene:Y48G8AR.2 / 171702 WormBaseID:WBGene00021693 Length:339 Species:Caenorhabditis elegans


Alignment Length:383 Identity:80/383 - (20%)
Similarity:125/383 - (32%) Gaps:125/383 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RIESWSRMAKERVGAVRRVTLD---RNSADEGTPSG-SGASSTAGGNGVSVVHILPIGEGSTTPP 75
            ||.|.|...     |:::.:|.   |.|:..|:.|. ||.||.  ||         :..|.|:|.
 Worm    41 RIRSLSTCV-----AIKKTSLQEKRRASSVAGSESSESGLSSP--GN---------VSHGRTSPL 89

  Fly    76 PQPMTPPPSASSVTSTTSGIGSV-SAGSVSDSCDLPTDSEEVAIAKECQPIQPASQLHGMHGGMG 139
            |:......|....|     :|.: ::|:....|       ...|..:|        .|.:..|..
 Worm    90 PKWNNRLCSTCQCT-----LGYILNSGTKCKKC-------SSHICDKC--------AHSVSSGSA 134

  Fly   140 LN--HHHMGTV-------SATGTDILRGPAEVFHSPLHLHHQSRSFPPRLQRTPSISSQSSVDSA 195
            .|  .:.:.||       ||...:.::|..|.          .::....|....|...::|| ..
 Worm   135 QNPQKYSLCTVCYSERELSAAKNEWVQGSDEA----------EKTSEQLLNVMKSSEKRNSV-QI 188

  Fly   196 PSRHSGHRGSSPQIRTFGPDGRSSLPS-----------EPGF-----------PHHLARSPSPMR 238
            |:.....:|.:|..|..      :||:           |||.           |.....||||. 
 Worm   189 PATPPAVKGKAPYKRNL------TLPAIQTSYLSVPDEEPGLVQSAGGNSNFSPKFWGGSPSPR- 246

  Fly   239 TISLDARCGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRSQP 303
                ..|..|.|:|::. .:.:|:....||.:|                          .||...
 Worm   247 ----SPRSFSSANSSNI-SINSPAAPNDSLRAL--------------------------HPREAI 280

  Fly   304 GVDPAMGPAS--PLGALQPD-LYRMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFDLT 358
            | .||..|.|  ||..:..| ..::|......:|.|.|...|:|..:.:.....|.|:
 Worm   281 G-SPAPRPMSSTPLSGVPEDSTIQIPQVERRRSAFEGSRRSGKLRRQSEATVPTFQLS 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 4/18 (22%)
C2B_Synaptotagmin 473..601 CDD:175975
Y48G8AR.2NP_490838.3 PHD_SF 15..159 CDD:389947 34/153 (22%)
FYVE_Slp3_4_5 95..148 CDD:277286 12/72 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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