DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and Doc2b

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_031899.2 Gene:Doc2b / 13447 MGIID:1100497 Length:412 Species:Mus musculus


Alignment Length:442 Identity:121/442 - (27%)
Similarity:179/442 - (40%) Gaps:78/442 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 TPSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPSPMRTISLDARCG 247
            |.||....::|..|    |......||..:.|.....||     |....|:|:|.     ||...
Mouse    11 TISIQEHMAIDVCP----GPIRPIKQISDYFPRFPRGLP-----PTAAPRAPAPP-----DAPAR 61

  Fly   248 SPAHSADPGDLRTPS----PSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRSQPGVDPA 308
            |||.||.|   |:||    .....:..|.|..|..                    |...||..||
Mouse    62 SPAASASP---RSPSDGARDDDEDVDQLFGAYGAS--------------------PGPSPGPSPA 103

  Fly   309 MGPASPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFDLTVHLIEAHNLSPIEEG 373
            ..||.| ...:||:    ||    ...:...|:|.|...:.||.....|...:.:|..|.|::..
Mouse   104 RPPAKP-PEDEPDV----DG----YESDDCTALGTLDFSLLYDQENNALHCTISKAKGLKPMDHN 159

  Fly   374 GFRDPYVRLMLQPEVD-SRKRQTHIHRGESNPYFDQHFK-FPVSRDQLQGKELILQVLDYDRYSH 436
            |..||||:|.|.|... :.|.:|...|...||.:::... :.::.:.:..|.|.:.|.|.|::.|
Mouse   160 GLADPYVKLHLLPGASKANKLRTKTLRNTLNPSWNETLTYYGITDEDMVRKTLRISVCDEDKFRH 224

  Fly   437 NDIIGEVRISVDGLD----------LSKSVEIWGDLLRTKKPKEDRPELLCSLNYLPQAERLTVV 491
            |:.|||.|:.:..|.          |.|.:.:  |....|. .|:|..:|.||.|..|.:.|.|.
Mouse   225 NEFIGETRVPLKKLKPNHTKTFSICLEKQLPV--DKAEDKS-LEERGRILISLKYSSQKQGLLVG 286

  Fly   492 IMKARNLDTL-----QEPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSNYLHNA 551
            |::..:|..:     .:||||.||..:..:..|.||::.|.  ..||.:||.|.:.::...|...
Mouse   287 IVRCAHLAAMDANGYSDPYVKTYLKPDVDKKSKHKTAVKKK--TLNPEFNEEFCYEIKHGDLAKK 349

  Fly   552 AIEI----YVVGAGSEATEIGCCGLGPQESGTGCQHWHDMINNARKPTAMWH 599
            .:|:    |.:|..::.  ||...||....|...:||.|.:.|..|....||
Mouse   350 TLEVTVWDYDIGKSNDF--IGGVVLGINAKGERLKHWFDCLKNKDKRIERWH 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 36/133 (27%)
C2B_Synaptotagmin 473..601 CDD:175975 40/136 (29%)
Doc2bNP_031899.2 Mediates interaction with DYNLT1. /evidence=ECO:0000250 1..90 28/95 (29%)
Negatively regulates targeting to plasma membrane 1..36 8/28 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..123 33/126 (26%)
C2A_Rabphilin_Doc2 127..250 CDD:176000 33/122 (27%)
Mediates interaction with STXBP3. /evidence=ECO:0000269|PubMed:17548353 257..375 36/122 (30%)
C2B_Rabphilin_Doc2 269..401 CDD:176030 40/135 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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