DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and TC2N

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001122067.2 Gene:TC2N / 123036 HGNCID:19859 Length:490 Species:Homo sapiens


Alignment Length:550 Identity:107/550 - (19%)
Similarity:187/550 - (34%) Gaps:131/550 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PSASSVTSTTSGIGSVSA----GSVSD--SCDLPTDSEEV--AIAK-ECQPIQPASQ-----LHG 133
            |::.:.|.:...:.|||.    |...|  ...||:|.:||  .:.| :...|||.:|     |..
Human    34 PNSQNATISVPPLTSVSVKPQLGCTEDYLLSKLPSDGKEVPFVVPKFKLSYIQPRTQETPSHLEE 98

  Fly   134 MHGGMGLNHHHMGTVSATGTDILRGPAEVFHSPLHLHHQ-----SRSFPPRLQRTPSISSQSSVD 193
            :.|....:........::.:.  .||:...::|.:::..     ||.||||              
Human    99 LEGSARASFGDRKVELSSSSQ--HGPSYDVYNPFYMYQHISPDLSRRFPPR-------------- 147

  Fly   194 SAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPSPMRTISLDARCGSPAHSADPGDL 258
                        |...|.:|                   |...:||..|.   |||..|....||
Human   148 ------------SEVKRLYG-------------------SVCDLRTNKLP---GSPGLSKSMFDL 178

  Fly   259 RTPS----PSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRSQPGVDPAMGPASPLGALQ 319
            ...|    ....||:|:...|....:|.|                 |...:|.            
Human   179 TNSSQRFIQRHDSLSSVPSSSSSRKNSQG-----------------SNRSLDT------------ 214

  Fly   320 PDLYRMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFDLTVHLIEAHNLS-PIEEGGFRDPYVR-- 381
                        :|........|||::::.|:..:..:.:.:::..:|| |...|......::  
Human   215 ------------ITLSGDERDFGRLNVKLFYNSSVEQIWITVLQCRDLSWPSSYGDTPTVSIKGI 267

  Fly   382 LMLQPEVDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIGEVRIS 446
            |.|...|..:   :....|.:...|.:.|.|.:....||...|:.::  ..:......|||..:|
Human   268 LTLPKPVHFK---SSAKEGSNAIEFMETFVFAIKLQNLQTVRLVFKI--QTQTPRKKTIGECSMS 327

  Fly   447 VDGLDLSKSVEIWGDLLRTKKPKEDRPELLCSLNYLPQAERLTVVIMKARNLDTLQEP-----YV 506
            :..|. ::.::...|:....|......||.....:.....|:.:.|::||.|.:...|     :|
Human   328 LRTLS-TQEMDYSLDITPPSKISVCHAELELGTCFQAVNSRIQLQILEARYLPSSSTPLTLSFFV 391

  Fly   507 KIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFNL-QSNYLHNAAIEIYVVGAGSEATEIGCC 570
            |:.:..:|:.|.||||.:.|:.: ....|.|...|.| ||.......|::|...:......:|..
Human   392 KVGMFSSGELIYKKKTRLLKASN-GRVKWGETMIFPLIQSEKEIVFLIKLYSRSSVRRKHFVGQI 455

  Fly   571 GLGPQESG-TGCQHWHDMINNARKPTAMWH 599
            .:....:. .....|.:.:.|..|....||
Human   456 WISEDSNNIEAVNQWKETVINPEKVVIRWH 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 24/124 (19%)
C2B_Synaptotagmin 473..601 CDD:175975 30/133 (23%)
TC2NNP_001122067.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..215 8/66 (12%)
C2A_Tac2-N 240..342 CDD:176066 19/107 (18%)
C2B_Tac2-N 353..487 CDD:176074 30/133 (23%)
Nuclear localization signal. /evidence=ECO:0000255 447..449 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.