DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and tc2n

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_009305708.1 Gene:tc2n / 101885722 -ID:- Length:465 Species:Danio rerio


Alignment Length:458 Identity:90/458 - (19%)
Similarity:170/458 - (37%) Gaps:73/458 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 PPRLQRTPSI---SSQSSVDSAPSRHSGHR-GSSPQIRTFGPDGRSSLPSEPGFPHHLARSPSPM 237
            ||..:..|.|   ...|.:....:::|||. |.....|:...:.::          .||.....|
Zfish    45 PPDGREVPFIIPTFKPSYIQPRGAQYSGHNIGQQSTTRSTYAERKA----------ELAGVSQMM 99

  Fly   238 RTISLDARCGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPL-LIPPR- 300
            ....::...........||.||  .|:..:..:...|:|:..|.|.:     .|||.. |..|: 
Zfish   100 YDPDVNLNSSHMISYVSPGSLR--RPTLKNRVNYNPGTGLDHSDAQR-----LCLSMFDLSNPQG 157

  Fly   301 -------------SQPGVDPAMGPASPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVKYDY 352
                         |...|..:.|.:..|.:            :.|:..|.....|::.:.:||:.
Zfish   158 RVERYDSVSSIQSSTSSVQDSFGSSRSLES------------ITLSGDERDREPGKVCVHLKYEA 210

  Fly   353 HLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKR---QTHIHRGESNPYFDQHFKFPV 414
            .:..:.:.|::..:||...|   |....::.::..:...|.   ::.:.....:..|.:.|.|.:
Zfish   211 AVEQVWITLVKCTDLSVYNE---RVEQQKIGVKGVITVNKPVRFKSTLKEASEDTVFMETFVFTL 272

  Fly   415 SRDQLQGKELILQVLDYDRYSHND---IIGEVRISVDGLDLSKSVEIWGDLLRTKKPKEDRPELL 476
            :.:|::...|:|::     .:|..   .:||..:|:..|. .:..:.|.:.....|......||.
Zfish   273 NLEQIRRSALVLRL-----QAHTPRKRTLGECVLSLRSLG-PQETKHWLEFKHPSKTHVCHAELQ 331

  Fly   477 CSLNYLPQAERLTVVIMKARNLDTLQEP-----YVKIYLIQNGKRIKKKKTSITKSDDPTNPIWN 536
            .:|.:.|...|:.:.|:..:||.:...|     :||:.|:..||.:.|:||...||.. ....|.
Zfish   332 LALCFQPVNSRMQLQILSTQNLPSSSSPLTQSYFVKVDLLGEGKFLLKRKTKAVKSSG-GQVQWG 395

  Fly   537 EAFTFNLQSNYLHNAAIEIYVVGAGSEATE--IGCCGLG-PQESGTGCQHWHDMINNARKPTAMW 598
            |...|.:.|.. ||..:.:.:....|...:  :|...|. ...|....:.|.|.:.|..|....|
Zfish   396 EVLHFPITSQD-HNLQLSVKLYSRSSVRRKHLLGQVLLSLDSSSPEAVEQWKDAMANPEKVVTSW 459

  Fly   599 HYI 601
            |.:
Zfish   460 HRV 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 21/127 (17%)
C2B_Synaptotagmin 473..601 CDD:175975 35/135 (26%)
tc2nXP_009305708.1 C2 215..317 CDD:301316 18/110 (16%)
C2B_Tac2-N 328..462 CDD:176074 35/135 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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