DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and doc2a

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_031748920.1 Gene:doc2a / 101730387 XenbaseID:XB-GENE-922476 Length:391 Species:Xenopus tropicalis


Alignment Length:411 Identity:103/411 - (25%)
Similarity:166/411 - (40%) Gaps:88/411 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 HLARS--PSPMRTISLDARCGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKGVAGGRC 291
            |:|.:  |.|:|.|. ......|.:|  |...|||||:                      .....
 Frog    16 HMAINVCPGPIRPIQ-QISDYFPRYS--PWPERTPSPT----------------------GNPHN 55

  Fly   292 LSPLLIPPRSQPGVDPAMGPASPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFD 356
            ||||.|||         .|..:...:...|.|          ..:.|.|:|.|...:.||.....
 Frog    56 LSPLDIPP---------CGAETADDSADVDNY----------DSDESTALGTLEFDLLYDPEQCI 101

  Fly   357 LTVHLIEAHNLSPIEEGGFRDPYVRLMLQP-EVDSRKRQTHIHRGESNPYFDQHFKF-PVSRDQL 419
            |...::.|..|.|::..|..||||::.|.| ...:.|.:|...|...||.:::...: .::::.:
 Frog   102 LQCCILRAKGLKPMDFNGLADPYVKIHLLPGACKANKLKTRTVRNSLNPTWNESLTYCGITQEDM 166

  Fly   420 QGKELILQVLDYDRYSHNDIIGEVRISVD----------GLDLSKSVEIWG-------------- 460
            ..|.|.:.|.|.|:.|||:.|||.|:.:.          .|.|.:.:.:..              
 Frog   167 GKKILRISVCDEDKLSHNEFIGETRVPLRRLKPGERKHFNLCLERQIPLASPSSMTAALRGISCY 231

  Fly   461 --DLLRTKK-PKEDRPELLCSLNYLPQAERLTVVIMK-----ARNLDTLQEPYVKIYLIQNGKRI 517
              :|.|.:: ..|:|..:|.||.|..:...|.|.||:     |.:::...:||||.||..:.::.
 Frog   232 LKELERCQEWELEERGRILLSLTYSSERGGLVVGIMRCAHLAAMDVNGFSDPYVKTYLKPDVEKK 296

  Fly   518 KKKKTSITKSDDPTNPIWNEAFTFNLQSNYLHNAAIEI----YVVGAGSEATEIGCCGLGPQESG 578
            .|.||.:.|.  ..||.:||.|.:|:....|...::|:    |.:|..::.  ||....|....|
 Frog   297 SKHKTVVKKK--TLNPEFNEEFFYNISQLELQKRSLEVTVWDYDLGKSNDF--IGGVTFGMSSKG 357

  Fly   579 TGCQHWHDMINNARKPTAMWH 599
            ...:||.:.::...|.|..||
 Frog   358 ECLKHWMECLSTPNKRTEHWH 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 34/149 (23%)
C2B_Synaptotagmin 473..601 CDD:175975 39/136 (29%)
doc2aXP_031748920.1 C2A_Rabphilin_Doc2 86..209 CDD:176000 33/122 (27%)
C2 248..380 CDD:417471 39/135 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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