DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and LOC100497338

DIOPT Version :10

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_002938753.2 Gene:LOC100497338 / 100497338 XenbaseID:XB-GENE-29083647 Length:398 Species:Xenopus tropicalis


Alignment Length:276 Identity:86/276 - (31%)
Similarity:139/276 - (50%) Gaps:30/276 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 GRLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDS--RKRQTHIH------ 398
            |:|.|.:.||.....|.:::|||.:| |...   .||:||:.:..:.|.  ...||.||      
 Frog   131 GKLKLSLYYDKKKMALLINVIEATDL-PAHS---HDPFVRIKVFSKADDPHSSVQTIIHEWDTKV 191

  Fly   399 -RGESNPYFDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDL 462
             :...||.|.:.|...:...||....|..:|.|:|:||.:.:|||.|.::.||..||::|::.||
 Frog   192 VKNSRNPVFVESFTCTLKESQLLSTSLKFEVKDFDKYSRHTLIGETRATLQGLKTSKTLELYEDL 256

  Fly   463 LRTKKPKEDRPELLCSLNYLPQAERLTVVIMKAR--NLDTLQE--PYVKIYLIQNGKRIKKKKTS 523
              .:|.|:...|:|.||..||.|:::.|.|:|.:  :|.|:.|  .|.:|.:..|..:.|.:|:|
 Frog   257 --QE
KTKDAIGEVLISLKCLPTAQKIEVGILKFKTSSLSTISERDVYARIDVFTNQHKQKHQKSS 319

  Fly   524 ITKSDDPTNPIWNEAFTFNL----QSNYLHNAAIEIY-VVGAGSEATEIGCCGLGPQESGTGCQH 583
            :......|  ::||.|.|.|    :::.|  ..:.:| .:.:|.:.  ||...||.|.:.....|
 Frog   320 LRAKSKVT--VFNETFLFGLPDPGKTHCL--ILVSLYETIASGRKL--IGQTSLGNQNTKAEDGH 378

  Fly   584 WHDMINNARKPTAMWH 599
            |..|:...|:|.|.||
 Frog   379 WELMMQTLRQPVAKWH 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 PHA03307 39..>267 CDD:223039
C2 341..463 CDD:472691 42/129 (33%)
C2B_Synaptotagmin 473..601 CDD:175975 41/136 (30%)
LOC100497338XP_002938753.2 C2 129..258 CDD:472691 43/132 (33%)
C2 265..396 CDD:472691 41/136 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.