DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and syt12

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_002936546.1 Gene:syt12 / 100496899 XenbaseID:XB-GENE-988426 Length:414 Species:Xenopus tropicalis


Alignment Length:341 Identity:105/341 - (30%)
Similarity:159/341 - (46%) Gaps:44/341 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 RSQPGVDPAMGPAS------------PLGALQPDLYRMPDGPVYLTAPESSHA------------ 340
            :.||...||...|:            |:..:..||...|.|.:..:....|.:            
 Frog    78 KRQPAAKPANNMANLNDTYESINEFGPIELINKDLEMTPYGMLRKSISTDSLSSVSSIGNNFGQD 142

  Fly   341 --VGRLHLRVKYDYHLFDLTVHLIEAHN-LSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHRGES 402
              ||::.:.:.||.|...|.|.||:..: |...|:|.|...:|.:.|.|:    ::...|.|.:.
 Frog   143 ITVGQIEVTMDYDVHSNTLHVALIQGKDLLERKEDGNFESCFVHISLLPD----EQIVGISRIQG 203

  Fly   403 NPY---FDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLS-KSVEIWGDLL 463
            |.|   ||:.|..|:....|:...|...:...|........|...:.:..|||: :....|..|.
 Frog   204 NAYSVMFDETFSIPLDPLALEENSLKFSIFGIDGDDRKVSTGVAELKLSDLDLALRPFNTWIYLQ 268

  Fly   464 RTKKPKEDRPELLCSLNYLPQAERLTVVIMKARNL-----DTLQEPYVKIYLIQNGKRIKKKKTS 523
            ...|..:...|:|.||:|||.|||||||::|.|||     .|..:|:||:||:|:|::|.||||:
 Frog   269 DVNKATDTVGEILLSLSYLPTAERLTVVVVKVRNLLWTEGKTTADPFVKVYLLQDGRKISKKKTA 333

  Fly   524 ITKSDDPTNPIWNEAFTFNLQSNYLHNAAIEIYVVGA--GSEATEIGCCGLGPQESGTGCQHWHD 586
            :.:.|  .||::|||..|::.:..|...::.|.|...  ...|..||...:||..||.|..||:.
 Frog   334 VKRDD--RNPVFNEAMIFSVPAIVLQELSLRITVAECCEDGRAENIGHVIIGPSTSGMGMTHWNQ 396

  Fly   587 MINNARKPTAMWHYIR 602
            |:...|||.:|||.||
 Frog   397 MLATLRKPVSMWHQIR 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 32/126 (25%)
C2B_Synaptotagmin 473..601 CDD:175975 58/134 (43%)
syt12XP_002936546.1 C2 146..257 CDD:387358 29/114 (25%)
C2B_Synaptotagmin-12 277..412 CDD:176051 58/136 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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