DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and sytl5

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_012813070.1 Gene:sytl5 / 100496000 XenbaseID:XB-GENE-982310 Length:814 Species:Xenopus tropicalis


Alignment Length:646 Identity:142/646 - (21%)
Similarity:227/646 - (35%) Gaps:226/646 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DEGTPSGSGASSTAGGNGVSVVHILPIGEGSTTPPPQPMTPPPSASSVTSTTSGIGSVSAGSVSD 105
            |..:.|..|:|.:|.|:      :..:..|.::|..:...|   :|..:|:.:.||::.|...| 
 Frog   274 DVRSESRPGSSLSARGS------VDSLDTGVSSPKSKGNAP---SSYQSSSINVIGTLPARQSS- 328

  Fly   106 SCDLPTDSEEVAIAKECQPIQPASQLHGMHGGMGLNHHHMGTVSATGT------DILRGPAEVFH 164
                ||.|                    ||.....:|...|..:.|.|      |:.:|      
 Frog   329 ----PTAS--------------------MHSAASNSHSRSGVQNGTKTSSSIPEDMSKG------ 363

  Fly   165 SPLHLHHQSRSFPPRLQRTPS-ISSQSSVDSAPSRH----SGHRGSSPQIRTFGPDGRSSLP--- 221
                  |:.|:     ..||| :.|::|:.|..|:.    |||         |..:.:.|:.   
 Frog   364 ------HERRA-----SATPSLVISRASLSSEQSKSEYDLSGH---------FTEENQESISMRS 408

  Fly   222 -SEPGF----PHHLAR--------SPSPMRTISLDARCGSP---AHSADP-GDLRTPSPSQSSLA 269
             |.|.:    |.::.:        .||...|.|::|...|.   .|...| .|..|.|.:..||.
 Frog   409 ISVPDYLNKDPEYIDKIDEDFDDLGPSTNLTKSMNAHTLSDRKWTHLNVPDADADTRSLTSISLY 473

  Fly   270 SLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRSQPGVDPAMGPASPLGALQPDLYRMPDGPVYLTA 334
            |..|..|                                                          
 Frog   474 SETGDYG---------------------------------------------------------- 480

  Fly   335 PESSHAVGRLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGGFR-DPYVRLMLQPEVDSR-KRQTHI 397
              :....|.:.|.:.|.|....|.|.:....||:..:|...| ||||:..|.|:...: ||:|.|
 Frog   481 --NLRITGEILLNINYSYKTGALNVVVKNCRNLAVADEKKNRTDPYVKAYLLPDKSRQSKRKTKI 543

  Fly   398 HRGESNPYFDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDL 462
            ....::|.|::..|:.:|..||:.:.|.|.|...||:..|..:|||.|.:|..:.....:....|
 Frog   544 KTNTTDPDFNETLKYVISHTQLETRTLQLTVWHNDRFGRNSFLGEVDIPLDSCNFENQEDECFQL 608

  Fly   463 LRTKKPKED---------RPELLCSLNYLPQAERLT----------------------------- 489
                :||.|         :.|:...|.|:...:.||                             
 Frog   609 ----QPKMDLASDVTLQYKGEITVGLRYITPEKNLTLPLDKVAEKKSFRKSKKANVKVPSGGLVE 669

  Fly   490 VVIMKARNLDTLQ-----EPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTF-NLQSNYL 548
            |:|..|:||..::     :.:||.||:.:..:..|.||.:.|.  ..||.||..||| :||::.|
 Frog   670 VLIKNAKNLTAMKSGGSSDTFVKGYLLPDNNKSTKHKTPVVKK--TVNPEWNHTFTFASLQTSDL 732

  Fly   549 HNAAIEIYVVGAGSEATEI---GCCGLGPQESGTGCQH----------------WHDMINN 590
            .|..:|:.|.|..|..:.:   |.| ||   .|:|..:                |..|::|
 Frog   733 SNVCVELTVWGKESLTSNVFLGGVC-LG---CGSGVSYGDIVDWMDSHGEEQFLWQKMMDN 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 37/123 (30%)
C2B_Synaptotagmin 473..601 CDD:175975 42/172 (24%)
sytl5XP_012813070.1 FYVE_Slp5 65..111 CDD:277305
C2A_SLP-4_5 485..609 CDD:175995 38/127 (30%)
C2B_SLP_1-2-3-4 623..801 CDD:175987 42/173 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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