DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and syt5

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_002938321.1 Gene:syt5 / 100493612 XenbaseID:XB-GENE-991349 Length:416 Species:Xenopus tropicalis


Alignment Length:272 Identity:104/272 - (38%)
Similarity:168/272 - (61%) Gaps:15/272 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 VGRLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHRGESNPY 405
            :|:|...:.||:....|.|.:|:|.:|..::.||..||||::.|.|: ..:|.:|.:||...||.
 Frog   136 LGKLQYSLDYDFQTGQLVVGIIQAADLPALDIGGTSDPYVKVYLLPD-KKKKYETKVHRKTLNPT 199

  Fly   406 FDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDLLRTKKPKE 470
            |::.|.|.|...:|.||.|::.|.|:||:|.:|.|||||:.::.:||:..:|.|.||...:|.::
 Frog   200 FNESFTFKVPYAELGGKTLVMSVYDFDRFSKHDAIGEVRVHMNTVDLAHVIEEWQDLQSAEKEEQ 264

  Fly   471 DRPELLC-SLNYLPQAERLTVVIMKARNLDT-----LQEPYVKIYLIQNGKRIKKKKTSITKSDD 529
            ::...:| ||.|:|.|.:|||::::|:||..     |.:|||||:|:|||||:|||||:|.|  :
 Frog   265 EKLGDICFSLRYVPTAGKLTVIVLEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKK--N 327

  Fly   530 PTNPIWNEAFTFNLQSNYLHNAAIEIYVVG----AGSEATEIGCCGLGPQESGTGCQHWHDMINN 590
            ..||.:||:|:|.:....:....:.:.|:.    ..:||  ||...:|...:||..:||.||:.|
 Frog   328 TLNPYYNESFSFEVPFEQIQKVQVVLTVLDYDKLGKNEA--IGKIFVGCNATGTELRHWSDMLAN 390

  Fly   591 ARKPTAMWHYIR 602
            .|:|.|.||.::
 Frog   391 PRRPIAQWHTLQ 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 47/121 (39%)
C2B_Synaptotagmin 473..601 CDD:175975 55/137 (40%)
syt5XP_002938321.1 C2A_Synaptotagmin-1-5-6-9-10 135..258 CDD:176031 48/122 (39%)
C2B_Synaptotagmin-1 267..402 CDD:176047 55/138 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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