DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and LOC100493529

DIOPT Version :10

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_002932169.1 Gene:LOC100493529 / 100493529 -ID:- Length:428 Species:Xenopus tropicalis


Alignment Length:189 Identity:38/189 - (20%)
Similarity:64/189 - (33%) Gaps:61/189 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 DYNPSNATLKNR---GHD--------IMLKFEDGAGTIKINGFEYELQQLHWHSPSEHTINGRRF 144
            ||:.:.||...:   |.|        |:.|.:...|..:.:| ||:..|:      ..|:  ..:
 Frog   130 DYSVNTATYSLQDLCGKDIDTAALESIIAKHKSLEGLSQASG-EYQFLQI------VSTL--ENY 185

  Fly   145 ALELHMVHEGRNRRMAVVTVLYKIGRADTFIRSLEKELEGIAEMEEAEKNVGMIDPTKIKIGSRK 209
            .:|.|.|.:...:::.|     .||.            |||:..:|....:..|           
 Frog   186 GVEWHSVRDAEGQKLIV-----GIGP------------EGISLCKEDFSPINRI----------- 222

  Fly   210 YYRYTGSLTTPPCTQNVTWSVVRKVRTVTRKQ----VKLLRVAVHDDANSNARPVQPTN 264
                     |.|..|..|.|......|:|::.    |.|.:|.....|:...|.:..|:
 Frog   223 ---------TYPVIQMATQSGKNVYLTITKESGNSLVLLFKVVSTRAASGLYRAITETH 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 PHA03307 39..>267 CDD:223039 38/189 (20%)
C2 341..463 CDD:472691
C2B_Synaptotagmin 473..601 CDD:175975
LOC100493529XP_002932169.1 Syt2_N 5..116 CDD:409249
C2A_Synaptotagmin-1-5-6-9-10 153..271 CDD:176031 31/163 (19%)
C2B_Synaptotagmin-1 280..415 CDD:176047
Blue background indicates that the domain is not in the aligned region.

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