DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and LOC100486361

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_002931826.4 Gene:LOC100486361 / 100486361 -ID:- Length:959 Species:Xenopus tropicalis


Alignment Length:681 Identity:131/681 - (19%)
Similarity:234/681 - (34%) Gaps:210/681 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KERVGAVRRVT---LDRNSADEGTPSGSGASSTAGGNGVSVVHILPIGEGSTTPPP-----QPMT 80
            :::.|.|::||   ....|..:..|..|.:..       .:||:.|..:.|::..|     :...
 Frog   356 RKQNGEVKQVTEQPYKLKSFSQRPPVVSSSED-------EMVHVNPPRKSSSSMIPRSTYNKSKG 413

  Fly    81 PPPSASSVTSTTSGIGS---VSAGSVSDS------CDLPTDSEEVAIAKECQPIQPASQLHGMHG 136
            .|.|.::..|.|:||.|   .|:||...|      ..||:.|:|   .|...|:.|..:|.    
 Frog   414 SPISKNASLSETNGIASQNEESSGSSRSSKRSKLPVRLPSVSKE---TKVDVPLSPRDKLP---- 471

  Fly   137 GMGLNHHHMGTVSATGTDILRGPAEVFHSPLHLHHQSRSFPPRLQRTPSISSQSSVDSAPS---- 197
                |...:.|.|.....:                 :....|.::.||..:.|..:|:..|    
 Frog   472 ----NVSQLETASCKEESV-----------------TPEIKPEVKGTPYSNVQILIDTVTSDEEQ 515

  Fly   198 ----------------RHS-----------GHRGSSPQIRTFGPDGRSSLPS------------- 222
                            .|:           |:..|:|..:..|.....||.:             
 Frog   516 GATASVKAAQRSEDVVEHATCESEDGKSLDGNVDSNPTSQAIGVTSARSLVNIYTSTETYNKPQT 580

  Fly   223 ------EPGFPHHLARSPSPMRT---------ISLDARCGSPAHSADPGDLRTPSPSQSSLASLA 272
                  ||.....|:||...:.:         ||...:.....||:|.......|.|..|.:.|:
 Frog   581 LSHQLLEPERAKELSRSTPALLSETESDTASEISFQLKRHRKTHSSDSNSSDMASVSSVSNSVLS 645

  Fly   273 GGSGMGGSSAGKGVAGGRCLSPLLIPPRSQPGVDPAMGPASPLGALQPDLYRMPDGPVYLTAPES 337
            ..||..||                        ||                               
 Frog   646 VYSGDFGS------------------------VD------------------------------- 655

  Fly   338 SHAVGRLHLRVKYDYHLFDLTVHLIEAHNLSPIEE-GGFRDPYVRLMLQPE-VDSRKRQTHIHRG 400
              |.|.:...:.||....:..:.:.:..:|:.::| .|..||||:..|.|: ....||:|.:.|.
 Frog   656 --AQGAVEFSLDYDEKNREFQISVSQCKDLAIVDEKKGRSDPYVKTYLLPDKARMGKRKTSVKRR 718

  Fly   401 ESNPYFDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDLLRT 465
            .:||.:::..::.:.:..|..::|.|.|...|....|..:||:.|.:...|.|.:...|..|   
 Frog   719 TTNPVYNEVLRYKIEKMVLLIQKLNLSVWHNDPLGRNSFLGEMEIDLTSWDWSNTKSNWYPL--- 780

  Fly   466 KKPKE-------DRPELL-CSLNYLPQAE---------RLTVVIMKARNLDTLQ----EPYVKIY 509
             ||:.       |...:: .|:.|:|...         .:.:.:...::|..|:    :.:||.|
 Frog   781 -KPRSVSAMNGVDHLGVMNLSIKYIPPGSLGPKHPTSGEVHIWVKDTKDLPQLRPSGVDSFVKCY 844

  Fly   510 LIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFN-LQSNYLHNAAIEIYVVGAGSEATE-IGCCGL 572
            ::.:..:...:||.:.|.|  :||::|....:: ..:..|.:|.:|:.|......:.. :|...|
 Frog   845 VLPDTSKKSYQKTRVIKKD--SNPVFNHTIVYDGFHTEDLRDACVELTVWDHEKLSNHFLGGIRL 907

  Fly   573 GPQESGTGCQH-----WHDMINNARKPTAMW 598
            |   .|||..:     |.|   :.::..|.|
 Frog   908 G---LGTGFSYGIAVDWMD---STQEEVAFW 932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 30/123 (24%)
C2B_Synaptotagmin 473..601 CDD:175975 29/147 (20%)
LOC100486361XP_002931826.4 PHD_SF 13..>68 CDD:419867
C2A_SLP-1_2 657..781 CDD:176039 31/127 (24%)
C2B_SLP_1-2-3-4 795..950 CDD:175987 29/146 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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