DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and tc2n

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_002933250.4 Gene:tc2n / 100485673 XenbaseID:XB-GENE-983033 Length:487 Species:Xenopus tropicalis


Alignment Length:601 Identity:120/601 - (19%)
Similarity:200/601 - (33%) Gaps:180/601 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NSADEGTPSGSGASSTAGGNGVSVVHILPIGEGSTTPPPQPMTPPPSASSVTSTTSGIGSVSAGS 102
            |..|...|:..|:            ||:.:             ||.|:.||..        ..|.
 Frog    23 NEEDGSNPTRKGS------------HIVDL-------------PPMSSVSVKK--------QVGC 54

  Fly   103 VSD--SCDLPTDSEEVAIA----KECQPIQPAS-----QLHGMHGGMGLNHHHMGTVSATGTDIL 156
            ..|  ...||:|..||...    |:.. |||.:     ||.|:          .|:..||.||..
 Frog    55 TEDYLLSKLPSDGREVPFIVPTFKQSY-IQPKASANPGQLEGL----------KGSARATFTDRK 108

  Fly   157 RGPAEVFHSPLH----------LHHQSRSFPPRLQRTPSISSQSSVDSAPSRHSGHRGSSPQIRT 211
            ...:.::...|:          |.|.|   |..::|                  |...:.| :|.
 Frog   109 TELSAMYQQDLNYDVVYNPGYVLQHVS---PDMIRR------------------GKLKTDP-VRL 151

  Fly   212 FGP--DGRSSLPSEPGFPHHLARSPSPMRTISLDARCGSPAHSADPGDLRTPSPSQSSLASLAGG 274
            :|.  |.||:..::           ||..|.:|....|||.:          .....|::|:...
 Frog   152 YGSVCDLRSNKVTD-----------SPGVTGTLYDFNGSPRN----------IQRYDSVSSIRSS 195

  Fly   275 SGMGGSSAGKGVAGGRCLSPLLIPPRSQPGVDPAMGPASPLGALQPDLYRMPDGPVYLTAPESSH 339
            :.....|.|                 |...:|                      .:.|:..|.. 
 Frog   196 NSSRKDSQG-----------------SNRSLD----------------------TITLSGDEKD- 220

  Fly   340 AVGRLHLRVKYDYHLFDLTVHLIEAHNLS-PIEEGGFRDPYVR-LMLQPEVDSRKRQTHIHRGES 402
             .|||:.:::|...:..:.:.:::..:|| |:..|.....|:: ::..|:....|  :....|..
 Frog   221 -FGRLNFKLRYIVAVEQIWITVVKIKDLSWPVSCGENPSIYIKGIITLPKAVPFK--SSAKEGSL 282

  Fly   403 NPYFDQHFKFPVSRDQLQGKELILQVLDYD----RYSHNDIIGEVRISVDGLDLS-KSVEIWGDL 462
            :..|.:.|.|.:....||...|:.:||...    ..||        .|:...||| :..:.|.:|
 Frog   283 DTEFMETFVFAIKHQSLQASRLVFKVLSLTPRKRTISH--------CSISLRDLSEEETDHWLEL 339

  Fly   463 LRTKKPKEDRPELLCSLNYLPQAERLTVVIMKARNLDTLQEP-----YVKIYLIQNGKRIKKKKT 522
            :.:.|....:.||.....:.....|:.:.|:||:||.....|     :||:.:......:.||||
 Frog   340 VPSSKVTVCQAELQVGTCFQAINSRIQLQILKAQNLPNSSTPLSINFFVKVEMFSTEGLLYKKKT 404

  Fly   523 SITK-SDDPTNPIWNEAFTF--NLQSNYLHNAAIEIYVVGAGSEATEIGCCGL-GPQESGTGCQH 583
            .:.| ::...|  |.|...|  .|:...: |..|::|...:......||...: ....|......
 Frog   405 RLLKVTNGQVN--WGETMIFPVTLKEEGI-NFLIKLYSRSSVRRKHFIGQVWISSDSNSSEAADQ 466

  Fly   584 WHDMINNARKPTAMWH 599
            |.|.|.:..|....||
 Frog   467 WTDTIQHPEKVVTKWH 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 27/128 (21%)
C2B_Synaptotagmin 473..601 CDD:175975 33/136 (24%)
tc2nXP_002933250.4 C2A_Tac2-N 237..339 CDD:176066 23/111 (21%)
C2B_Tac2-N 350..484 CDD:176074 33/136 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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