DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and syt17

DIOPT Version :10

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001096478.1 Gene:syt17 / 100125097 XenbaseID:XB-GENE-949409 Length:474 Species:Xenopus tropicalis


Alignment Length:447 Identity:126/447 - (28%)
Similarity:196/447 - (43%) Gaps:67/447 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 PPRLQRTPSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPSPMRTIS 241
            ||.|....|...:...|:..|...    ::||  ...||.|.|            .|.:...|.|
 Frog    58 PPWLVSNRSEDKEGDSDNTTSEPP----ATPQ--DTSPDRRRS------------SSDTSRSTYS 104

  Fly   242 LDARCGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRSQPGV- 305
            |..|..|.       :.|.||.....:..:.    .|...|.|.:.              ||.| 
 Frog   105 LTRRISSL-------ESRRPSSPLIDIKPIE----FGALGAKKEIV--------------QPTVL 144

  Fly   306 DPAMGPASPLGALQPDLYRMP---DGPVYLTAPE--SSHAVGRLHLRVKYDYHLFDLTVHLIEAH 365
            ..:..|.......:|.||.:.   |....||..|  :.:.:|.||...:||.....|.|.:|||.
 Frog   145 RKSYTPEDYFRKFEPRLYSLDSSNDDVDSLTDDEILTKYQLGMLHFSTQYDLLHNYLNVRVIEAR 209

  Fly   366 NL-SPIEEGGFR------DPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQGKE 423
            :| .||...|.|      :|||::.|.|: ....:||.:.|...||.|::.:.|.:...:.|.:.
 Frog   210 DLPPPISYDGSRQDMAHSNPYVKICLLPD-QKNSKQTGVKRKTQNPVFEERYTFEIQFLEAQRRT 273

  Fly   424 LILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDLLRTKKPKEDRPELLCSLNYLPQAERL 488
            |:|.::|:|::|.:.:||:|.:.::.:||.|....|..::.:.:.:.:..|||.||||||.|.||
 Frog   274 LLLTIVDFDKFSRHCVIGKVAMPLNEVDLVKGGHWWKAIIPSSQNEVELGELLLSLNYLPSAGRL 338

  Fly   489 TVVIMKARNL---DTLQ--EPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSNYL 548
            .|.|::|:.|   |..|  :|:|||.|:...|..|.||||..:.  ..:|.:||:|:|.:....|
 Frog   339 NVDIIRAKQLLQTDMSQGSDPFVKIQLVHGLKLAKTKKTSCMRG--TIDPFYNESFSFKVPQEEL 401

  Fly   549 HNAAIEIYVVGAGSEATE--IGCCGLGPQESGT-GCQHWHDMINNARKPTAMWHYIR 602
            .|.::...|.|...:.:.  ||...:|...||: ...||..|:|:.|.....||.:|
 Frog   402 ENVSLVFTVYGHNMKTSNDFIGRIVIGQYASGSPESNHWRRMLNSNRTAVEQWHSLR 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 PHA03307 39..>267 CDD:223039 21/89 (24%)
C2 341..463 CDD:472691 40/128 (31%)
C2B_Synaptotagmin 473..601 CDD:175975 50/135 (37%)
syt17NP_001096478.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..112 17/71 (24%)
C2A_Synaptotagmin-15-17 186..314 CDD:176036 40/128 (31%)
C2B_Synaptotagmin-17 323..457 CDD:176055 50/135 (37%)

Return to query results.
Submit another query.