DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and doc2b

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_017211854.1 Gene:doc2b / 100006713 ZFINID:ZDB-GENE-090615-1 Length:648 Species:Danio rerio


Alignment Length:664 Identity:162/664 - (24%)
Similarity:247/664 - (37%) Gaps:168/664 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RIESWSRMAKERVG-AVRRVTLDRNSADEGTPSGSGASSTAGGNGVSVVHILPIGE-----GSTT 73
            |.|....:.:.|:| .|.|:              ....|:|.|||:|  ..|..||     ||  
Zfish    61 RAEQLELIEQHRIGRLVERL--------------DNMRSSAMGNGLS--QCLLCGEVFGLLGS-- 107

  Fly    74 PPPQPMTPPPSASSV--------TSTTSGIGSVSAGSVSDS--CDLPTDSEEV----------AI 118
                        |||        ..|..||.:.:.|.....  |.:.::..||          |:
Zfish   108 ------------SSVLCLDCCMKVCTKCGIETTAGGQKRTQWLCKICSEQREVWKRSGAWFYKAL 160

  Fly   119 AKECQPIQPA---SQLHGMHGGMGLNHHHMGTVSAT------------GTDI----LRGPAEVFH 164
            .|..:||:.:   ::...:..|..|.......:|.|            |:|.    .....:.|.
Zfish   161 PKHIRPIKDSILDNRKPVIERGEQLPVARSAPISYTWAQSRVYLSESDGSDAELSECSSDRKTFA 225

  Fly   165 SPLHLHHQSRSFPPRLQRTPSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSE------ 223
            |..:....|.|...::| ||    |||..| |:|.:.|. .||          |||.||      
Zfish   226 SETNQRRDSESSGGQVQ-TP----QSSFTS-PTRGNVHI-ESP----------SSLVSEQSSSSS 273

  Fly   224 --PGFPHHLARSPSPMRTISLDARCGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKGV 286
              ||....:......:.|....:|.||         ||:.|.||.|....|..:           
Zfish   274 FNPGLEDEVIDHSRTLLTPPALSRAGS---------LRSSSTSQKSEGPQADAN----------- 318

  Fly   287 AGGRCLSPLLIPPRSQPGVDPAMGPASPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVKYD 351
                         |.:..:|.|.| |:.|.|.:.:  ..||...|  ..:.|..:|.|...:.||
Zfish   319 -------------RDEDDLDQAFG-ATALVASKKE--EEPDVEGY--DSDDSTTLGTLDFSLLYD 365

  Fly   352 YHLFDLTVHLIEA--------HNLSPIEEGGFRDPYVRLMLQPEVD-SRKRQTHIHRGESNPYFD 407
            .....|...:.:|        ..|.|::..|..||||:|.|.|... :.|.:|...|...||.:.
Zfish   366 QENNALHCTINKAKLPVPRYKKGLKPMDHNGLSDPYVKLHLLPGASKANKLRTKTLRNTLNPVWS 430

  Fly   408 QHFK-FPVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGL------DLSKSVEIWGDLLRT 465
            :... :.::.:.:..|.|.:.|.|.|::.||:.|||.||.:..|      :.|..:|....:.:|
Zfish   431 ETLTYYGITDEDMVRKTLRISVCDEDKFRHNEFIGETRIPLKKLKPNQTKNFSNCLEKQLPIDKT 495

  Fly   466 -KKPKEDRPELLCSLNYLPQAERLTVVIMKARNLDTL-----QEPYVKIYLIQNGKRIKKKKTSI 524
             .|..|:|..::.||.|..|...|.|.|::..:|..:     .:||||.||..:..:..|.||::
Zfish   496 DDKSLEERGRIMISLKYSSQKSGLVVGIIRCAHLAAMDANGFSDPYVKTYLKPDENKKSKHKTAV 560

  Fly   525 TKSDDPTNPIWNEAFTFNLQSNYLHNAAIEI----YVVGAGSEATEIGCCGLGPQESGTGCQHWH 585
            .|.  ..||.:||.|.:.::...|....:|:    |.:|..::.  ||...||...||...:||.
Zfish   561 KKK--TLNPEFNEEFFYEIKYADLSKKTLEVTVWDYDIGKSNDF--IGGVSLGINASGERLKHWF 621

  Fly   586 DMINNARKPTAMWH 599
            |.:.|..|....||
Zfish   622 DCLKNKDKKIERWH 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 36/137 (26%)
C2B_Synaptotagmin 473..601 CDD:175975 40/136 (29%)
doc2bXP_017211854.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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