DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and doc2d

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001122026.1 Gene:doc2d / 100002795 ZFINID:ZDB-GENE-081104-451 Length:429 Species:Danio rerio


Alignment Length:452 Identity:101/452 - (22%)
Similarity:164/452 - (36%) Gaps:114/452 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PSEPGFPHHLARSPSPMRTISLDARCGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKG 285
            |.:..||.:...|..|:                .|....|||||...            |:||..
Zfish     8 PPQSHFPPNNTTSHLPL----------------PPSSSSTPSPSTPP------------SAAGPP 44

  Fly   286 VAGGRCLSPLLIPPRSQP--------GVDPAMGPASPLGALQPDLYRMPDGPVYLTAPESSHA-- 340
                   ||.:.||.|..        .::...||..|:..:.....|..|.|:....|.....  
Zfish    45 -------SPAVPPPPSPVKISMQEHFAINVCPGPILPIPQISDFFPRFHDFPITPPPPREKQVLK 102

  Fly   341 -----------------------------------VGRLHLRVKYDY--HLFDLTVHLIEAHNLS 368
                                               :|.|...:.:|.  :....|:|  :|..|.
Zfish   103 DKDKDGDRDGEKDRKREREQEENGEFADSDDDDTYLGTLEFNLLFDQENNCLHCTIH--KAKGLK 165

  Fly   369 PIEEGGFRDPYVRLMLQPEVD-SRKRQTHIHRGESNPYFDQHFKF-PVSRDQLQGKELILQVLDY 431
            .::..|..||||:|.|.|... :.|.:|...:...||.:::...: .::...:..|.|.|.|.|.
Zfish   166 AMDSNGLADPYVKLHLLPGASKANKLRTKTLKNTLNPVWNETLIYHGITAADMTTKTLRLCVCDM 230

  Fly   432 DRYSHNDIIGEVRISVDGLDLSKSVEIWGDLLRTKKPK---------------EDRPELLCSLNY 481
            ||...|:.|||||:::..|...:|.:....|.|..:.:               |:|..:|.||.|
Zfish   231 DRLGRNEFIGEVRVALKKLKEGESKKYNMGLERIAQTREGNSQAMDPAAPVAEEERGRILVSLLY 295

  Fly   482 LPQAERLTVVIMKARNLDTL-----QEPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTF 541
            ..:...|.|.|::..:|..:     .:|:|||.|..:..:..|.||::.|.  ..||.:||.|::
Zfish   296 NTEKNTLVVGIIRCAHLAAMDSNGYSDPFVKIILQPDMGKKSKYKTTVKKK--TLNPEFNEEFSY 358

  Fly   542 NLQSNYLHNAAIEI----YVVGAGSEATEIGCCGLGPQESGTGCQHWHDMINNARKPTAMWH 599
            ::..:.|....:||    |.:|..::.  ||...||....|...:||.:.:....|....||
Zfish   359 DVPHDQLAKKTLEISVWDYDLGMSNDF--IGGVELGINAKGDRLKHWFECLKYKGKKVEYWH 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 34/125 (27%)
C2B_Synaptotagmin 473..601 CDD:175975 37/136 (27%)
doc2dNP_001122026.1 C2A_Rabphilin_Doc2 138..261 CDD:176000 34/124 (27%)
C2B_Rabphilin_Doc2 288..420 CDD:176030 37/135 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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