DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Reck and tmeff2b

DIOPT Version :10

Sequence 1:NP_648733.2 Gene:Reck / 39629 FlyBaseID:FBgn0036463 Length:1071 Species:Drosophila melanogaster
Sequence 2:XP_021332671.1 Gene:tmeff2b / 797681 ZFINID:ZDB-GENE-101001-4 Length:358 Species:Danio rerio


Alignment Length:329 Identity:68/329 - (20%)
Similarity:104/329 - (31%) Gaps:95/329 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   677 CTLPGARSYRHGSSFYLECNL-----CSCFAGEIT----CTKQQCRLPGFVDSGYTSLPC----N 728
            |..|.:.|         :|..     ||.|..:.|    |....|:..|.......::.|    .
Zfish    40 CAFPSSLS---------DCQTPTGWNCSGFEEQDTDLFLCDTNTCKFDGECLRIGDTVTCICDFK 95

  Fly   729 CPAHYVPVCGSNGNTYPSACVAKCHLPEGDYVYGACNARNACQAAPPNSCPSGTQCL------DS 787
            |...|.|||||||.:|.:.|:.:         ..||..:.........:||.||:..      |:
Zfish    96 CSGDYAPVCGSNGESYENHCLLR---------KDACKLQTEVLVVSDGACPVGTRDAGSGSGDDA 151

  Fly   788 RKVCLASMQRPCLQYVCVNATASNCSTFHQGEVCDSQGRTYPNACALLKANPQGQVAYWSACQSS 852
            .:......|:          ..|.|.....|..||.....                 .|..|...
Zfish   152 NEGSAEISQK----------ETSTCDICQFGAECDEDSED-----------------VWCVCNID 189

  Fly   853 RFNTSPSPVCGINGVTY------KSSYAARAEYVLVDYVGRCREVGLLVSDM--GRRCRTVKCPA 909
            ..:.|.:|||..:|.:|      |.....:.|.:.|.|:|.|:|....||::  |   ..:.||.
Zfish   190 CSHISFNPVCASDGRSYDNPCQVKEVSCQKQERIEVKYLGHCKEEKDQVSEVPWG---LYIPCPE 251

  Fly   910 PVSKHC--------RLIVPPGACC------PLCAGGAFRIIYSRKQFDRAMYGLRAQSSTLLTLQ 960
            ....:|        ..:.||...|      |.|....:.::|......:..|.|      :.::.
Zfish   252 RYKDYCVHGECEYPSNLSPPTCSCHSGFIGPQCDRKDYNVMYVVPGSGKLRYVL------IASII 310

  Fly   961 GVLQ 964
            |.||
Zfish   311 GALQ 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReckNP_648733.2 MFS <727..791 CDD:475125 19/73 (26%)
KAZAL_FS 729..>753 CDD:238052 11/23 (48%)
tmeff2bXP_021332671.1 KAZAL 91..136 CDD:197624 13/53 (25%)
KAZAL 185..231 CDD:197624 12/45 (27%)
PHA02887 <245..285 CDD:165214 7/39 (18%)

Return to query results.
Submit another query.