DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reck and tmeff1b

DIOPT Version :9

Sequence 1:NP_001261853.1 Gene:Reck / 39629 FlyBaseID:FBgn0036463 Length:1071 Species:Drosophila melanogaster
Sequence 2:NP_001020472.1 Gene:tmeff1b / 553511 ZFINID:ZDB-GENE-050706-143 Length:364 Species:Danio rerio


Alignment Length:217 Identity:49/217 - (22%)
Similarity:75/217 - (34%) Gaps:74/217 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   707 CTKQQCRLPGFVDSGYTSLPC----NCPAHYVPVCGSNGNTYPSACVAKCHLPEGDYVYGACNAR 767
            |....||..|...:....:.|    .|..:|:||||:||:||.:.|..|         ..|||.:
Zfish    68 CDATTCRFNGICQNNGGDIKCVCQFQCSKNYIPVCGTNGDTYQNECYLK---------QAACNQQ 123

  Fly   768 NACQAA------PPNSCPSGTQCLD------SRKVCLASMQRPCLQYVCVNATASNCSTFHQGEV 820
            .:...|      |.:|..||....|      .:||                   :.||....|..
Zfish   124 KSIVLANEGPCDPDSSSGSGNGEFDGSGLESGKKV-------------------TKCSNCKYGAE 169

  Fly   821 CDSQGRTYPNACALLKANPQGQVAYWSACQSSRFNTSPSPVCGINGVTY------KSSYAARAEY 879
            ||..... .::|               :|:......:.:||||.:|.:|      :.:...:.|.
Zfish   170 CDEDAED-EDSC---------------SCKIDCSGHNENPVCGTDGNSYHNPCLVREASCMKQEQ 218

  Fly   880 VLVDYVGRC--------REVGL 893
            :.|.::|||        .|.||
Zfish   219 IDVKHLGRCPDKDKSKKTEAGL 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReckNP_001261853.1 KAZAL_FS 729..>753 CDD:238052 12/23 (52%)
tmeff1bNP_001020472.1 KAZAL 89..134 CDD:197624 16/53 (30%)
KAZAL 182..227 CDD:197624 10/44 (23%)
PHA02887 <263..300 CDD:165214
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3649
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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