DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Reck and reck

DIOPT Version :9

Sequence 1:NP_001261853.1 Gene:Reck / 39629 FlyBaseID:FBgn0036463 Length:1071 Species:Drosophila melanogaster
Sequence 2:XP_002938983.2 Gene:reck / 100486433 XenbaseID:XB-GENE-992359 Length:983 Species:Xenopus tropicalis


Alignment Length:975 Identity:325/975 - (33%)
Similarity:500/975 - (51%) Gaps:129/975 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 TCCNQVFGS--CRTACENL------SLVEFATGTGGDNRDELHRYCQLHQVEFWTCVNQTFDAIT 169
            :||||...:  ||..||.:      |.::.......|       ||....::.|||:|.:...::
 Frog    56 SCCNQAKDNLMCRDVCEQILSSKSESRIKHLFLRAPD-------YCPTSMIDVWTCINSSLPGVS 113

  Fly   170 RGAD-WSGRRCCQFGVLPHCRNVC--ATSTRSPVQNCRRSDEQTLYDCLERQEAADQCCGQA-RT 230
            :.:| |.|..||:..:...||..|  |:|.....:.||:..|..|..|:.|.|....||..| |.
 Frog   114 KKSDGWVGLGCCELAIAVECRRACKQASSKNDISKACRKQYETALISCINRNEMGSVCCSYAGRH 178

  Fly   231 SECLEACRAVFE-PANDNHDHVD-INGACGDRNADVIQCVNNHTDMTPLANAEQYIPCCEYSSKE 293
            :.|.|.|:|:|. .::.....:. :...|...:..::|||||:|...|:.|....:.||:.:...
 Frog   179 TNCREYCQAIFRTDSSPGPSQIKAVENFCASISPPLVQCVNNYTQSYPMRNPVDSLYCCDRAEDP 243

  Fly   294 HCRHTCRNLLHQNATLMERSEVIFGRLEAAGCGSPLPQLPFWQCFLTVTGKLYVPGGSGRAGGSL 358
            .|:..|:.:|....|   ..|::....|  ||..||||.|.||||                   |
 Frog   244 RCQAACKRILMSKKT---EPEIVDSLSE--GCTKPLPQDPLWQCF-------------------L 284

  Fly   359 AQGRISGQGGSLAEPNHLGMDAAKRQCCEQASSHKCRRLCNQIFTSNWWDARS--SFENECMDQP 421
            ...|....|.::|.|...|:|.|:..||.:|:|..||.||.::::::|.:.::  .||..|...|
 Frog   285 ESSRAVRPGVNIAPPPSAGLDGAELHCCSKANSSNCRDLCTKLYSTSWGNTQAWQDFEFACEYNP 349

  Fly   422 GERELRRCIESVDAPCELGCQGLSFCSNFNNRPTELFRSCTPEHDAAAREDWQLLQQRGTVRVLG 486
            .|..:..|:..|..||:|||:.|:||:|||||||||||||..:.|..|..|.: |.::|::::..
 Frog   350 LEAPMLTCLADVREPCQLGCRNLTFCTNFNNRPTELFRSCNIQSDQGAMNDMK-LWEKGSIKMPF 413

  Fly   487 QELFIKNTSRCAPDKWRALVCALQLKPCTRVGLFNGICSEDCHELLDECLDWTLQHQR------P 545
            ..:.:.:..:|.|:.|:|:.|:||:|||......:.||..||.|:|.:|.|    |.|      .
 Frog   414 MNIPVLDIKKCHPEMWKAIACSLQIKPCNSKSRGSIICKTDCIEILTKCGD----HSRFPESHTA 474

  Fly   546 KDICSRLKEKDDDDSPLPCISLESYLK--PGDASPEEFQGITSPCAQKPCNGSEVCILQRGG-NQ 607
            :.||..|...|:::.   ||.|:||||  |.|.:.||   :|.||...||..:.:|.:.|.| ..
 Frog   475 ESICELLSPSDENED---CIPLDSYLKSSPLDNAIEE---VTHPCNPNPCPANHLCEVNRKGCLP 533

  Fly   608 GYSCIP-----GCNLGQDSKLFVPFGSYVRL--GKSNLHKKLEVGQFPLAEHIVCSCGLQGRLEQ 665
            |..|:|     ||.||:.|...|..|..:::  |.:..:|             :|:||..|.||.
 Frog   534 GEPCLPYFCSQGCKLGEASDFLVRHGVLIQMPSGAAGCYK-------------ICTCGQSGTLEN 585

  Fly   666 CQPLPSY-MHAHCTLPGARSYRHGSSFYLECNLCSCFAGEITCTKQQC-------RLPGFVDSGY 722
            |...... :...|.:.|.|. .||.||.::||:|||.||.:.|:..||       |:       :
 Frog   586 CLDTQCVDLQKSCIVGGQRK-NHGESFKVDCNICSCVAGTLRCSNHQCPHSEEDRRM-------F 642

  Fly   723 TSLPCNCPAHYVPVCGSNGNTYPSACVAKC-HLPEGDYVYGACNARNACQAAPPNSCPSGTQCLD 786
            |.|||||...:|||||.||.||||||:|:| .|.:..:.:|.|::::.|.   ||.|....:|:.
 Frog   643 TGLPCNCEDQFVPVCGQNGRTYPSACIARCVGLLDHQFEFGLCSSKDVCN---PNPCSRNERCIP 704

  Fly   787 SRKVCLASMQR-PCLQYVCVNATASNCSTFHQGE-VCDSQGRTYPNACALLKANPQGQ-VAYWSA 848
            .|:||:.|.:: .|.||.|: .....|.  |..: |||::...:.|.|.|.:   :|: ::|..:
 Frog   705 KRQVCITSYEKFGCAQYECI-PRQLKCE--HSRDPVCDTENMEHMNLCTLYQ---RGRLLSYKGS 763

  Fly   849 CQSSRFNTSPSPVCGINGVTYKSSYAARAEYVLVDYVGRCREVGLLVSDMG--RRCRTVKCPAPV 911
            ||.  |..|..|:||.||.||.:..:|.:..|.|||.|.|::||:. ||.|  ..|.:::||...
 Frog   764 CQP--FCKSAEPICGHNGETYPNVCSAYSNRVAVDYYGHCQDVGIF-SDQGLHSECLSIQCPTIP 825

  Fly   912 SKHCRLIVPPGACCPLCAGGAFRIIYSRKQFDR-AMYGLRAQSSTLLTLQGVLQQLDGLVQVSEC 975
            :..|:.:.|||||||||| |..||::.:::.|. ||    |..:|.:|:..:||::...:.|.:|
 Frog   826 ATVCKPVTPPGACCPLCA-GVLRILFDKEKLDTFAM----ATKNTPITVMDILQKIRQHISVPQC 885

  Fly   976 QLTGFLTMEVGIFVAIVPSSSIKRPTHLQLEACAREAEKISSLINAQSPRITTNLALSCLTVSHL 1040
            .:.|:|:||..|.:.|||..|  .|..:|::||.:|||||:||||:.||.:.:.:.||.|..|.:
 Frog   886 DVFGYLSMESDIIILIVPVDS--PPKSIQIDACNKEAEKINSLINSDSPTLVSQVPLSALITSEV 948

  Fly  1041  1040
             Frog   949  948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReckNP_001261853.1 KAZAL_FS 729..>753 CDD:238052 16/24 (67%)
reckXP_002938983.2 MFS <647..672 CDD:391944 17/24 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 337 1.000 Domainoid score I1120
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9622
Inparanoid 1 1.050 549 1.000 Inparanoid score I1126
OMA 1 1.010 - - QHG49635
OrthoDB 1 1.010 - - D279140at33208
OrthoFinder 1 1.000 - - FOG0007351
OrthoInspector 1 1.000 - - oto105261
Panther 1 1.100 - - LDO PTHR13487
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5473
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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