DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and PUP3

DIOPT Version :10

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_011020.3 Gene:PUP3 / 856830 SGDID:S000000896 Length:205 Species:Saccharomyces cerevisiae


Alignment Length:195 Identity:44/195 - (22%)
Similarity:84/195 - (43%) Gaps:9/195 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GTTIVGIIYKDGVILGADTR-ATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQL 102
            |..:|.:..||.|.:..|.| .::...||:|.....||  .:::....|.|.|.....::...:.
Yeast     9 GGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHY--GHVFLGITGLATDVTTLNEMFRYKT 71

  Fly   103 ELHRLQTDREVRVVAANTMLKQMLF--RYQGHISAALVLGGVDKTG-PHIYSIHPHGSSDKL-PY 163
            .|::|:.:|.:.......::...|:  |:..:....:|.|...|:| |.|......|..|:. .:
Yeast    72 NLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDF 136

  Fly   164 ATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASGVFNDLGSGSNIDLCVIRKGSV--EYLR 226
            ...|:.|.....:.||.::|:|..|:..:.:..|:.:....|..||....:.:|:|..|  .||:
Yeast   137 IVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKKDEVVKRYLK 201

  Fly   227  226
            Yeast   202  201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 43/192 (22%)
Pr_beta_C 231..264 CDD:463597
PUP3NP_011020.3 proteasome_beta_type_3 8..201 CDD:239728 43/193 (22%)
Blue background indicates that the domain is not in the aligned region.

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