DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and PRE2

DIOPT Version :10

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_015428.1 Gene:PRE2 / 856218 SGDID:S000006307 Length:287 Species:Saccharomyces cerevisiae


Alignment Length:196 Identity:57/196 - (29%)
Similarity:98/196 - (50%) Gaps:6/196 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG--AGTAADTEMTTDLISSQ 101
            |||.:...::.|:|:..|:|||.|..|:.:...|:  :..|.:..|  ||.|||.:.....:.||
Yeast    75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKV--IEINPFLLGTMAGGAADCQFWETWLGSQ 137

  Fly   102 LELHRLQTDREVRVVAANTMLKQMLFRYQGH--ISAALVLGGVDKTGPHIYSIHPHGSSDKLPYA 164
            ..||.|:....:.|.||:.:|..::::|:|.  ....::.|...|.||.||.:...|:..|....
Yeast   138 CRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIF 202

  Fly   165 TMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASGVFNDLGSGSNIDLCVIRKGSVEYLRNYE 229
            .:|||...|..|.:|.:|.|||.|:...|.:.:|.:....|..||.:::|..:.:....|..|::
Yeast   203 CVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHD 267

  Fly   230 L 230
            :
Yeast   268 V 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 53/189 (28%)
Pr_beta_C 231..264 CDD:463597 57/196 (29%)
PRE2NP_015428.1 proteasome_beta_type_5 76..264 CDD:239730 55/189 (29%)

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