DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and PBB1

DIOPT Version :9

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_566818.1 Gene:PBB1 / 822364 AraportID:AT3G27430 Length:273 Species:Arabidopsis thaliana


Alignment Length:262 Identity:169/262 - (64%)
Similarity:204/262 - (77%) Gaps:14/262 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PRAGFNFDNCKRNATLLNRGFKPPTTTKTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIH 74
            |:.||:||.||||..|..:|.|.|:..||||||||:|:||||||||||||||||||:||||.|||
plant    10 PKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIH 74

  Fly    75 YLAKNIYCCGAGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQMLFRYQGHISAALVL 139
            |:|.||||||||||||||..||::||||.|||.||.|:.||:.|.|:||:.||.||||:||||||
plant    75 YMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVL 139

  Fly   140 GGVDKTGPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASGVFN 204
            ||||.||||:::|:||||:|.||:|||||||||||:|||:::|..|:.:||.|||.::|.||:||
plant   140 GGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFN 204

  Fly   205 DLGSGSNIDLCVIRKGSVEYLRNYELAN------KKGKRQLDYRFKTGTSTVLHTNIKDLLVTER 263
            |||||||:|:|||.||:.||||||...|      .||     |.| |..:.||.|.|..||  ||
plant   205 DLGSGSNVDICVITKGNKEYLRNYMEPNPRTYVSSKG-----YSF-TKKTEVLLTKITPLL--ER 261

  Fly   264 VQ 265
            |:
plant   262 VE 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 PRE1 42..232 CDD:223711 136/189 (72%)
proteasome_beta_type_7 42..228 CDD:239732 134/185 (72%)
Pr_beta_C 232..264 CDD:289249 13/37 (35%)
PBB1NP_566818.1 proteasome_beta_type_7 40..228 CDD:239732 136/187 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 285 1.000 Domainoid score I377
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2093
Inparanoid 1 1.050 333 1.000 Inparanoid score I673
OMA 1 1.010 - - QHG53608
OrthoDB 1 1.010 - - D977476at2759
OrthoFinder 1 1.000 - - FOG0001188
OrthoInspector 1 1.000 - - mtm1211
orthoMCL 1 0.900 - - OOG6_101382
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1020
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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