DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and Psmb11

DIOPT Version :10

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_780413.1 Gene:Psmb11 / 73902 MGIID:1921152 Length:302 Species:Mus musculus


Alignment Length:225 Identity:60/225 - (26%)
Similarity:104/225 - (46%) Gaps:17/225 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LPRAGFNFDNCKRNATLLNRGFKPPTTTKT-------GTTIVGIIYKDGVILGADTRATEGPIVS 66
            ||:||         ...:.||..|.|..:.       |||.:...::.|||..||||::.|..|:
Mouse    21 LPQAG---------GWAVPRGCDPQTFLQIHGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVA 76

  Fly    67 DKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQMLFRYQG 131
            .....|:..:.:.:....:||:||......::..:|.|..|:..:...|.....:|..|:..|:|
Mouse    77 CPASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLLAAMMSCYRG 141

  Fly   132 -HISAALVLGGVDKTGPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVR 195
             .:..|..|.|.|.:||.::.::..|:..:....::||||..|..|.:..:..|::.:|...|.|
Mouse   142 LDLCVATALCGWDHSGPALFYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLAR 206

  Fly   196 DAIASGVFNDLGSGSNIDLCVIRKGSVEYL 225
            .|:|.....|..||.::||..:|:...||:
Mouse   207 CAVAHATHRDAYSGGSVDLFHVRESGWEYV 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 49/185 (26%)
Pr_beta_C 231..264 CDD:463597
Psmb11NP_780413.1 proteasome_beta_type_5 50..237 CDD:239730 51/187 (27%)
Blue background indicates that the domain is not in the aligned region.

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