DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and PSMB3

DIOPT Version :10

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_002786.2 Gene:PSMB3 / 5691 HGNCID:9540 Length:205 Species:Homo sapiens


Alignment Length:193 Identity:46/193 - (23%)
Similarity:88/193 - (45%) Gaps:14/193 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GTTIVGIIYKDGVILGADTR-ATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQL 102
            |..::.:..|:.|.:.||.| ..:..:|: .:..||..:...:|...||.|.|.:.....:..:|
Human     8 GGAVMAMKGKNCVAIAADRRFGIQAQMVT-TDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRL 71

  Fly   103 ELHRLQTDREVRVVAANTMLKQMLFRYQ-GHISAALVLGGVD-KT-GPHIYSIHPHGSSDKLPYA 164
            .|:.|:..|:::.....:|:..:|:..: |......|:.|:| || .|.|.|:...|    .|..
Human    72 NLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIG----CPMV 132

  Fly   165 T---MGSGSLAAMT--VFESRWKPDLSEEEGKKLVRDAIASGVFNDLGSGSNIDLCVIRKGSV 222
            |   :.||:.|...  :.||.|:|::..:...:.:..|:.:.|..|..||..:.:.:|.|..:
Human   133 TDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKI 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 45/190 (24%)
Pr_beta_C 231..264 CDD:463597
PSMB3NP_002786.2 proteasome_beta_type_3 6..201 CDD:239728 46/193 (24%)
Blue background indicates that the domain is not in the aligned region.

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