DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and PSMA6

DIOPT Version :9

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_002782.1 Gene:PSMA6 / 5687 HGNCID:9535 Length:246 Species:Homo sapiens


Alignment Length:259 Identity:49/259 - (18%)
Similarity:78/259 - (30%) Gaps:107/259 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LNRGFKPPTTTKTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAAD 90
            :|:|         |.|.|.:..||..::....:..: .::.......:..:.:||.|...|..||
Human    32 INQG---------GLTSVAVRGKDCAVIVTQKKVPD-KLLDSSTVTHLFKITENIGCVMTGMTAD 86

  Fly    91 TEMTTDLISSQLELHRLQTDREVRVVAANTMLK-------QMLFRYQGHIS-------------A 135
            :              |.|..| .|..|||...|       .||.:....||             .
Human    87 S--------------RSQVQR-ARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGC 136

  Fly   136 ALVLGGVD-KTGPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIA 199
            .::|.|:| :.||.:|...|.|                    :...:|              |.|
Human   137 CMILIGIDEEQGPQVYKCDPAG--------------------YYCGFK--------------ATA 167

  Fly   200 SGVFNDLGSGSNIDLCVIRKGSVEYLRNYELANKKGKRQLDYRFK-------TGTSTVLHTNIK 256
            :|                    |:...:.....||.|::.|:.|:       |..||||..:.|
Human   168 AG--------------------VKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFK 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 PRE1 42..232 CDD:223711 34/210 (16%)
proteasome_beta_type_7 42..228 CDD:239732 34/206 (17%)
Pr_beta_C 232..264 CDD:289249 11/32 (34%)
PSMA6NP_002782.1 proteasome_alpha_type_6 8..220 CDD:239723 49/259 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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