DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and PSMA4

DIOPT Version :10

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_002780.1 Gene:PSMA4 / 5685 HGNCID:9533 Length:261 Species:Homo sapiens


Alignment Length:224 Identity:52/224 - (23%)
Similarity:99/224 - (44%) Gaps:32/224 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQLELH 105
            |.:||:..|||:|.|:.|.....:.......||:.|.:::.|..||..:|..:.|:.:....:.:
Human    33 TCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRY 97

  Fly   106 RLQTDREV---RVVAANTMLKQMLFRYQGH--ISAALVLGGVDK-TGPHIYSIHPHGSSDKLPYA 164
            .||....:   ::|.|...:||...::.|.  ...:|:..|.|| .|..:|...|.|:.......
Human    98 LLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKAT 162

  Fly   165 TMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASG--VFN---DLG--SGSNIDLC------- 215
            .:|:.|.||:::.:..:|      ||:..::.|:|..  |.|   |:.  |...:::.       
Human   163 CIGNNSAAAVSMLKQDYK------EGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTRENG 221

  Fly   216 -----VIRKGSVEYL-RNYELANKKGKRQ 238
                 |:::..||.| :.:|....|.:|:
Human   222 KTVIRVLKQKEVEQLIKKHEEEEAKAERE 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 48/211 (23%)
Pr_beta_C 231..264 CDD:463597 2/8 (25%)
PSMA4NP_002780.1 proteasome_alpha_type_4 3..216 CDD:239721 45/188 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..261 3/11 (27%)

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