DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and psma3

DIOPT Version :9

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001025358.1 Gene:psma3 / 564370 ZFINID:ZDB-GENE-050913-120 Length:255 Species:Danio rerio


Alignment Length:227 Identity:48/227 - (21%)
Similarity:83/227 - (36%) Gaps:36/227 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQ 101
            :..:|.:||..||||:.|.: :.....:..:.:..:|..:.:::....||..||....:::...:
Zfish    32 ENSSTAIGIRCKDGVVFGVE-KLVLSKLYEEGSNKRIFNIDRHVGMAVAGLLADARSLSEVAREE 95

  Fly   102 LELHRLQ----------TDREVRVVAANTMLKQMLFRYQGHISAALVLGGVDK-TGPHIYSIHPH 155
            ....|..          .||....|.|.|     |:........:.:||..|: .||.:|.:.|.
Zfish    96 ASSFRSNYGHDIPLKHLADRVAMYVHAYT-----LYSAVRPFGCSFILGSYDEDDGPQLYMVDPS 155

  Fly   156 GSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKK-------LVRDAIASGVFNDLGSGSNID 213
            |.:.......:|....||.|..|.....|::..|..|       :|.|.:....|       .::
Zfish   156 GIAYGYWGCAIGKAKQAAKTEIEKLQMKDMTCRELVKEVAKIIYIVHDEVKDKAF-------ELE 213

  Fly   214 LC---VIRKGSVEYLRN--YELANKKGKRQLD 240
            |.   .:.||..|.:..  .|.|.|..|..|:
Zfish   214 LSWVGEVTKGRHELVPKDVKEEAEKYAKESLE 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 PRE1 42..232 CDD:223711 43/212 (20%)
proteasome_beta_type_7 42..228 CDD:239732 42/208 (20%)
Pr_beta_C 232..264 CDD:289249 3/9 (33%)
psma3NP_001025358.1 proteasome_alpha_type_3 5..217 CDD:239720 40/197 (20%)
PRE1 6..241 CDD:223711 46/221 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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